New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5673612	52 (0.980)	4 (0.080)	4/246	NT	7.6%	coding (855/1881 nt)	rhlE‑II	ATP‑dependent RNA helicase
	?	NC_002947	= 5673663	47 (0.920)					coding (906/1881 nt)	rhlE‑II	ATP‑dependent RNA helicase

AGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGAGCTGCCGAATGTCGAGGAAGACTACGTC  >  NC_002947/5673464‑5673759                                                                                                                                                      |                                                                                                                                                    aGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAG                                                                                                                                                     <  5:155988‑M1/149‑1 (MQ=255)        cTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGccc                                                                                                                                              >  8:229435/1‑149 (MQ=255)                 gcACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAgg                                                                                                                                     <  5:204875/149‑1 (MQ=255)                   aCCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGgcg                                                                                                                                   >  2:42976/1‑149 (MQ=255)                       gATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTgg                                                                                                                               >  8:293601/1‑149 (MQ=255)                        aTCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTgg                                                                                                                               <  4:109887/148‑1 (MQ=255)                            cccTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGAc                                                                                                                          >  3:48107/1‑149 (MQ=255)                                  gcgcCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAg                                                                                                                    >  1:88983/1‑149 (MQ=255)                                      cTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCaa                                                                                                                                       <  4:326983/126‑1 (MQ=255)                                      cTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGcc                                                                                                                 >  1:237320/1‑148 (MQ=255)                                      cTGGGAACAGGTGTTGGTGTTCACACGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGAAAGGCCTGACCGCCGCCGCGATCAACGGCAACAAGAGCCAGAACGCACGCACCAAGGCGCTGGCCGACTTCAAGGcc                                                                                                                 >  1:84378/1‑148 (MQ=255)                                       tGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCaa                                                                                                               >  8:7401/1‑149 (MQ=255)                                         ggAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACa                                                                                                             <  4:48107/149‑1 (MQ=255)                                          gAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAg                                                                                                            <  7:7401/149‑1 (MQ=255)                                             cAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGt                                                                                                         <  1:42976/149‑1 (MQ=255)                                               ggtgttggtgttCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTgc                                                                                                       <  7:229435/149‑1 (MQ=255)                                               ggtgttggtgttCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTCGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTgc                                                                                                       >  1:266751/1‑149 (MQ=255)                                                gtgttggtgttCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAAGGGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTgc                                                                                                       >  1:100361/1‑149 (MQ=255)                                                 tgttggtgttCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTgcgc                                                                                                     >  3:43858/1‑149 (MQ=255)                                                       tgtTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActg                                                                                               >  7:293601‑M2/1‑146 (MQ=255)                                                       tgtTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActg                                                                                               >  4:43858‑M2/1‑146 (MQ=255)                                                       tgtTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCAAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACCCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActg                                                                                               >  1:137555‑M2/1‑146 (MQ=255)                                                             cccGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGcc                                                                                                                 >  5:220866/1‑125 (MQ=255)                                                             cccGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGcc                                                                                                                 <  6:220866/125‑1 (MQ=255)                                                             cccGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGcc                                                                                         >  7:242645/1‑149 (MQ=255)                                                              ccGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGc                                                                                                                  >  5:133623/1‑123 (MQ=255)                                                              ccGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGc                                                                                                                  <  6:133623/123‑1 (MQ=255)                                                              ccGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActgg                                                                                              <  5:123026‑M2/143‑5 (MQ=255)                                                              ccGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActgg                                                                                              >  6:123026‑M2/1‑139 (MQ=255)                                                              ccGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCa                                                                                        >  1:225559/1‑149 (MQ=255)                                                              ccGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCa                                                                                        >  5:225414/1‑149 (MQ=255)                                                              ccGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCa                                                                                        >  5:339348/1‑149 (MQ=255)                                                               cGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCAc                                                                                       <  2:266751/149‑1 (MQ=255)                                                                     aaGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGcc                                                                                                                 >  5:320985/1‑117 (MQ=255)                                                                     aaGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGcc                                                                                                                 <  6:320985/117‑1 (MQ=255)                                                                     aaGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActgg                                                                                              <  4:115293‑M2/136‑5 (MQ=255)                                                                     aaGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActgg                                                                                              >  3:115293‑M2/1‑132 (MQ=255)                                                                     aaGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACAt                                                                                 >  7:241178/1‑149 (MQ=255)                                                                                    cGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCt                                                                  <  2:88983/149‑1 (MQ=255)                                                                                     gCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTg                                                                 <  2:237320/149‑1 (MQ=255)                                                                                      ccTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTg                                                                 >  8:117223/1‑148 (MQ=255)                                                                                           ccGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTAAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATc                                                           <  6:225414/149‑1 (MQ=255)                                                                                              aGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGAc                                                        <  2:225559/149‑1 (MQ=255)                                                                                              aGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGAc                                                        <  8:242645/149‑1 (MQ=255)                                                                                              aGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGAc                                                        <  1:183402/149‑1 (MQ=255)                                                                                                tACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGAc                                                        >  1:326940/1‑147 (MQ=255)                                                                                                   cTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGtt                                                   >  5:60035/1‑149 (MQ=255)                                                                                                   cTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGtt                                                   >  3:65296/1‑149 (MQ=255)                                                                                                     ggAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggcgttctggct                                                                                            >  8:188304‑M1/1‑49 (MQ=255)                                                                                                     ggAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggcgttctggct                                                                                            <  7:188304‑M1/106‑58 (MQ=255)                                                                                                      gAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGc                                                 <  4:65296/148‑1 (MQ=255)                                                                                                         a‑aGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggcgttctggctcttgttgccgt                                                                                 <  8:316129‑M1/113‑69 (MQ=255)                                                                                                         a‑aGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggcgttctggctcttgttgccgt                                                                                 >  7:316129‑M1/1‑45 (MQ=255)                                                                                                           aGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCAt                                            <  2:326940/149‑1 (MQ=255)                                                                                                            gCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCAtg                                           <  8:241178/149‑1 (MQ=255)                                                                                                              aaGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCAtgtt                                         >  3:123999/1‑149 (MQ=255)                                                                                                                              cgcgATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGAGCTGc                         <  2:100361/149‑1 (MQ=255)                                                                                                                              cgcgATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGAGCTGc                         >  3:34676/1‑149 (MQ=255)                                                                                                                                      aCGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActggctcttgttgccgtggatcgcggcggcggtcaggccttgctt                                                     >  7:316129‑M2/1‑68 (MQ=255)                                                                                                                                      aCGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActggctcttgttgccgtggatcgcggcggcggtcaggccttgctt                                                     <  8:316129‑M2/113‑46 (MQ=255)                                                                                                                                        ggCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGAGCTGCCGAATGTCGa               <  4:34676/149‑1 (MQ=255)                                                                                                                                             caaGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGAGCTGCCGAATGTCGAgg             >  3:333525/1‑146 (MQ=255)                                                                                                                                                gagCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGcc                                                                                         <  2:253311/67‑1 (MQ=255)                                                                                                                                                gagCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGcc                                                                                         >  1:253311/1‑67 (MQ=255)                                                                                                                                                gagCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGa                              <  3:106591/126‑1 (MQ=255)                                                                                                                                                gagCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGa                              >  4:106591/1‑126 (MQ=255)                                                                                                                                                 agCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActggctcttgttgccgtggatcgcggcggcggtcaggccttgcttttcc                                                 <  7:188304‑M2/106‑50 (MQ=255)                                                                                                                                                 agCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTActggctcttgttgccgtggatcgcggcggcggtcaggccttgcttttcc                                                 >  8:188304‑M2/1‑57 (MQ=255)                                                                                                                                                   ccAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggcgttctggctcttgttgccgtggatcgcggcggcggtcaggccttgcttttccaggtactcggccaggcggttggcgccatgcttggttcgg          >  6:123026‑M1/1‑4 (MQ=255)                                                                                                                                                   ccAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggcgttctggctcttgttgccgtggatcgcggcggcggtcaggccttgcttttccaggtactcggccaggcggttggcgccatgcttggttcgg          <  5:123026‑M1/143‑140 (MQ=255)                                                                                                                                                   ccAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggcgttctggctcttgttgccgtggatcgcggcggcggtcaggccttgcttttccaggtactcggccaggcggttggcgccatgctt                 >  3:115293‑M1/1‑4 (MQ=255)                                                                                                                                                   ccAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggcgttctggctcttgttgccgtggatcgcggcggcggtcaggccttgcttttccaggtactcggccaggcggttggcgccatgctt                 <  4:115293‑M1/136‑133 (MQ=255)                                                                                                                                                   ccAGAACGCCCGCACCAAGGCGCTGGCCGACTTCGAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGAGCTGCCGAATGTCGa               >  4:206777/1‑138 (MQ=255)                                                                                                                                                   ccAGAACGCCCGCACCAAGGCGCTGGCCGACTTCGAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGAGCTGCCGAATGTCGa               <  3:206777/138‑1 (MQ=255)                                                                                                                                                    cAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggggttctggctcttgttgccgtggatcgcggcggcggtcaggccttgcttttccaggtacttggccaggcggttggcgccatgcttggttcgggtgaaca   >  1:137555‑M1/1‑3 (MQ=255)                                                                                                                                                    cAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggcgttctggctcttgttgccgtggatcgcggcggcggtcaggccttgcttttccaggtactcggccaggcggttggcgccatgcttggttcgggtgaaca   >  7:293601‑M1/1‑3 (MQ=255)                                                                                                                                                    cAGtacgcgcacgctgttggccttgaagtcggccagcgccttggtgcgggcgttctggctcttgttgccgtggatcgcggcggcggtcaggccttgcttttccaggtactcggccaggcggttggcgccatgcttggttcgggtgaaca   >  4:43858‑M1/1‑3 (MQ=255)                                                                                                                                                     aGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGAGCTGCCGAATGTCGAGGAAGACTACGTc  <  2:84378/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    AGCGTGCCTTGCTGGCGCACCTGATCACCCTGGGCGCCTGGGAACAGGTGTTGGTGTTCACCCGAACCAAGCATGGCGCCAACCGCCTGGCCGAGTACCTGGAAA‑AGCAAGGCCTGACCGCCGCCGCGATCCACGGCAACAAGAGCCAGAACGCCCGCACCAAGGCGCTGGCCGACTTCAAGGCCAACAGCGTGCGCGTACTGGTCGCCACCGACATCGCTGCCCGCGGCCTGGACATCGACCAGTTGCCCCATGTTGTCAACTTCGAGCTGCCGAATGTCGAGGAAGACTACGTC  >  NC_002947/5673464‑5673759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.