New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1728639 =	57 (1.080)	4 (0.080)	4/238	NT	6.8%	intergenic (+33/+90)	cspA‑I/PP_1523	major cold shock protein/hypothetical protein
	?	NC_002947	1728692 =	56 (1.130)					intergenic (+86/+37)	cspA‑I/PP_1523	major cold shock protein/hypothetical protein

GAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACT  >  NC_002947/1728547‑1728840                                                                                                                                                    |                                                                                                                                                      gAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTaaa                                                                                                                                                    >  4:23829/1‑149 (MQ=255)       gCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAAcc                                                                                                                                                  <  8:129410/145‑1 (MQ=255)       gCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAAcc                                                                                                                                                  >  7:129410/1‑145 (MQ=255)         gcatcagcgccgacggtgaagaggaaatcacctggcgtacatcatgaaacggcaggcttgctcgtttcagtaggaatgggtttaCCCGCCAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTcc                                                                                                                                            >  7:228292‑M1/85‑149 (MQ=255)         cTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTcc                                                                                                                                            >  6:314221/1‑149 (MQ=255)         cTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTc                                                                                                                                             >  6:275357/1‑148 (MQ=255)           atcagcgccgacggtgaagaggaaatcacctggcgtacatcatgaaacggcaggcttgctcgtttctgtaggaatgggtttaCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTa                                                                                                                                          >  8:237099‑M1/83‑149 (MQ=255)            cGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTa                                                                                                                                          <  3:23829/148‑1 (MQ=255)                 aGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGaaa                                                                                                                                    >  6:342750/1‑149 (MQ=255)                  gggCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAAc                                                                                                                                   <  8:319240/149‑1 (MQ=255)                                        gAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCatga                                                                                                             <  5:275357/149‑1 (MQ=255)                                          aGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCatgatg                                                                                                           <  5:342750/149‑1 (MQ=255)                                             cGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTa                                                                                                         <  5:314221/148‑1 (MQ=255)                                              gTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACg                                                                                                       >  5:43616/1‑149 (MQ=255)                                                aGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGc                                                                                                      >  6:58947/1‑148 (MQ=255)                                                  tGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAg                                                                                                   >  3:347255/1‑149 (MQ=255)                                                    ggCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGt                                                                                                 <  6:285410/149‑1 (MQ=255)                                                     gCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGt                                                                                                 >  7:187988/1‑148 (MQ=255)                                                      ccTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGa                                                                                               >  2:126919/1‑149 (MQ=255)                                                           gAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGc                                                                                                                           >  6:217528/1‑116 (MQ=255)                                                               ctctGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCctct                                                                                      >  3:182868/1‑148 (MQ=255)                                                                tctGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCtt                                                                                     >  4:64808/1‑148 (MQ=255)                                                                 ctGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCa                                                                                   >  6:271648/1‑149 (MQ=255)                                                                 ctGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCa                                                                                   >  6:255944/1‑149 (MQ=255)                                                                    gTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCg                                                                                >  8:43273/1‑149 (MQ=255)                                                                    gTTTAAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCGAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCg                                                                                >  6:123943/1‑149 (MQ=255)                                                                      ttCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTc                                                                                          <  3:162584/137‑1 (MQ=255)                                                                      ttCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTc                                                                                          >  4:162584/1‑137 (MQ=255)                                                                       tCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCatg                                                                                                              >  6:270598/1‑117 (MQ=255)                                                                       tCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCatg                                                                                                              <  5:270598/117‑1 (MQ=255)                                                                       tCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCg                                                                             >  7:221281/1‑149 (MQ=255)                                                                        cAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCg                                                                             <  4:347255/148‑1 (MQ=255)                                                                         aaGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGgc                                                                           >  6:270145/1‑149 (MQ=255)                                                                         aaGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGgc                                                                           >  6:158329/1‑149 (MQ=255)                                                                             cGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTg                                                                       <  4:182868/149‑1 (MQ=255)                                                                                 taggaatgggtttacccgcgaatacgggctatgcccgtggcagccaccgtggtggctgcttcgcgggTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGAt                                                                     >  8:237099‑M2/68‑149 (MQ=255)                                                                                 ggAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGc                                                                   <  5:270145/149‑1 (MQ=255)                                                                                   ggaatgggtttacccgcgaatacgggctatgcccgtggcagccaccgtggtggctgcttggcgggTAAACCCATTCCTACTGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGc                                                                   >  7:228292‑M2/66‑149 (MQ=255)                                                                                    gCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCa                                                                                                                >  8:110787/1‑102 (MQ=255)                                                                                    gCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCa                                                                                                                <  7:110787/102‑1 (MQ=255)                                                                                        gCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCt                                                                        <  6:243688/137‑1 (MQ=255)                                                                                        gCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCt                                                                        >  5:243688/1‑137 (MQ=255)                                                                                              CCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTc                                                                                          <  2:80698‑M1/113‑1 (MQ=255)                                                                                              CCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTc                                                                                          >  1:80698‑M1/1‑113 (MQ=255)                                                                                                ccgtggcagcCACCGTGGTGGCTGCTTCGCGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCCAGCCTGCCGTTTCATGATGTACGCCAGGTGATTTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCg                                                         <  1:238785/142‑1 (MQ=37)                                                                                                ccgtggcagcCACCGTGGTGGCTGCTTCGCGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCg                                                         >  2:238785/6‑146 (MQ=38)                                                                                                  gcgaatacgggctatgcccgtggcagccaccgtggtggctgcttcgcgggTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCctc                                                                                       <  7:160864‑M2/64‑1 (MQ=255)                                                                                                  gcgaatacgggctatgcccgtggcagccaccgtggtggctgcttcgcgggTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCctc                                                                                       >  8:160864‑M2/51‑114 (MQ=255)                                                                                                  GAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCa                                                  >  6:43616‑M1/1‑149 (MQ=255)                                                                                                    AGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATc                                                >  8:187988‑M1/1‑149 (MQ=255)                                                                                                     gcagcCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCAtct                                               >  2:103241/1‑149 (MQ=255)                                                                                                       agcCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCAtcttc                                             <  8:221281/149‑1 (MQ=255)                                                                                                       agcCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCAtcttc                                             <  5:271648/149‑1 (MQ=255)                                                                                                        gcCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCAtcttct                                            <  5:158329/149‑1 (MQ=255)                                                                                                            ccacGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTccc                                        >  5:101171/1‑149 (MQ=255)                                                                                                            ccacGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTccc                                        >  7:37686/1‑149 (MQ=255)                                                                                                             cacGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTcccc                                       <  7:43273/149‑1 (MQ=255)                                                                                                                 gTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCt                                   <  1:126919/149‑1 (MQ=255)                                                                                                                  tGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCtt                                  >  4:171532/1‑149 (MQ=255)                                                                                                                     cTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCt                               <  8:37686/149‑1 (MQ=255)                                                                                                                       gC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTc                                    >  1:189056/1‑142 (MQ=255)                                                                                                                       gC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTc                                    <  2:189056/142‑1 (MQ=255)                                                                                                                       gC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTc                              >  1:142112/1‑148 (MQ=255)                                                                                                                           cACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGATCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGAc                           <  3:64808/149‑1 (MQ=255)                                                                                                                                gCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGc                      <  2:142112/149‑1 (MQ=255)                                                                                                                                      cccGTATTCGCGGGTAAACCCATTCCCACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTcc                                <  6:159345/133‑1 (MQ=255)                                                                                                                                      cccGTATTCGCGGGTAAACCCATTCCCACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTcc                                >  5:159345/1‑133 (MQ=255)                                                                                                                                       ccGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCgg               >  5:107968/1‑149 (MQ=255)                                                                                                                                                  ggTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCgcgcagcgca    <  5:58947‑M2/147‑1 (MQ=255)                                                                                                                                                   gTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCAc   >  6:141974‑M2/2‑149 (MQ=255)                                                                                                                                                    tAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACt  <  6:101171/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GAGTACGCCTGCGTGCAGGGCCAGAAAGGCCTGCAAGCCGAAGACGTAGTGGGCCTCTGAGCCTCTGGTTTCAAGCCGTAGGAGCGGGCTTGCCCGCGAAGCAGCCACCACGGTGGCTGC‑‑CACGGGCATAGCCCGTATTCGCGGGTAAACCCATTCCTACAGAAACGAGCAAGCCTGCCGTTTCATGATGTACGCCAGGTGA‑TTTCCTCTTCACCGTCGGCGCTGATGCGGACCCAGCGGTCAGCATCTTCTTCCCCGTCTTCCTCGACCCAGCCACCCGGCGCGCAGCGCACT  >  NC_002947/1728547‑1728840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.