New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1941517 =	46 (0.870)	4 (0.080)	4/240	NT	8.5%	coding (59/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX
	?	NC_002947	1941547 =	43 (0.860)					coding (89/864 nt)	betX	choline/betaine/carnitine ABC transporter substrate‑binding protein BetX

TGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGGTGTGGCAACGG  >  NC_002947/1941410‑1941693                                                                                                                                            |                                                                                                                                                   gcctgcaacttcacgtcatagccgagtttttgcttgattacttcggcagccacgttggtggtcgccacgctgtcggcccaaccatccacgtaaccaatgcttacttctttggccatgagcgctgcacaggctatggccaAAGAAGTAAg                                                                                                                                           <  8:257394‑M2/10‑1 (MQ=255)  gtgtTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAg                                                                                                                                           <  8:40738/146‑1 (MQ=255)   gcaacttcacgtcatagccgagtttttgcttgattacttcggcagccacgttggtggtcgccacgctgtcggcccaaccatccacgtaaccaatgcttacttcttTGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAaagaa                                                                                                                                                <  3:236863‑M1/35‑1 (MQ=255)   gcaacttcacgtcatagccgagtttttgcttgattacttcggcagccacgttggtggtcgccacgctgtcggcccaaccatccacgtaaccaatgcttacttcttTGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAaagaa                                                                                                                                                >  4:236863‑M1/106‑140 (MQ=255)       gCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGt                                                                                                                                    >  5:18056/1‑148 (MQ=255)           gAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGt                                                                                                                               <  6:69197/149‑1 (MQ=255)               atgatgCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGAt                                                                                                                           <  6:96301/149‑1 (MQ=255)                           ccAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGt                                                                                                                                              <  5:158566/118‑1 (MQ=255)                           ccAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGt                                                                                                                                              >  6:158566/1‑118 (MQ=255)                            cAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGa                                                                                                                >  1:141404/1‑147 (MQ=255)                                    gACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGc                                                                                                       >  8:111778/1‑148 (MQ=255)                                                  ttGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTg                                                                                                                                      <  4:67972/103‑1 (MQ=255)                                                     aTGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACAGCACTGGTAATGGCCATGAGCGCTGAACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGAGGCTGc                                                                                     >  3:95138/1‑149 (MQ=255)                                                         cAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTg                                                                                                         <  8:53455/125‑1 (MQ=255)                                                         cAACTTTGAAGAAAATGCGACGGTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTg                                                                                                         >  7:53455/1‑125 (MQ=255)                                                          aaCTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCATGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGGATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACGAACGTGGCTGCCGAAg                                                                                >  8:195847/1‑149 (MQ=255)                                                             tttGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGc                                                                                                                   >  7:82665/1‑111 (MQ=255)                                                             tttGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGc                                                                                                                   <  8:82665/111‑1 (MQ=255)                                                                gaagaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGacc                                                                                                   >  6:144104/1‑124 (MQ=255)                                                                  agaaAATGCGACGTTTCCTGGGCGTGGTCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑TCT‑ATGTACAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCTAAGTAATCaa                                                                         <  4:95138/148‑1 (MQ=255)                                                                  agaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAg                                                                        <  6:66656/149‑1 (MQ=255)                                                                   gaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGt                                                                                                          <  5:71835/114‑1 (MQ=255)                                                                   gaaAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGt                                                                                                          >  6:71835/1‑114 (MQ=255)                                                                        tGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCaaaaa                                                                  <  2:141404/149‑1 (MQ=255)                                                                        tGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCaaaa                                                                   >  7:142642/1‑148 (MQ=255)                                                                           gACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATc                                                                           <  6:71812/137‑1 (MQ=255)                                                                           gACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATc                                                                           >  5:71812/1‑137 (MQ=255)                                                                           gACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTc                                                               >  5:265955/1‑149 (MQ=255)                                                                            aCGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCg                                                              <  7:111778/149‑1 (MQ=255)                                                                               tttCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGTCAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGc                                                            >  1:284875/1‑148 (MQ=255)                                                                                   cTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGa                                                       >  2:150757/1‑149 (MQ=255)                                                                                    tGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGAc                                                      >  1:222217/1‑149 (MQ=255)                                                                                      ggCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGAc                                                      <  2:284875/147‑1 (MQ=255)                                                                                      ggCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGAc                                                      <  6:18056/147‑1 (MQ=255)                                                                                         gTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTg                                                   >  1:174385/1‑147 (MQ=255)                                                                                              cACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGAAAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTg                                             >  8:310376/1‑148 (MQ=255)                                                                                                  gCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAaagaag                                                                                                                                               >  8:214436/1‑46 (MQ=255)                                                                                                  cttacttcttTGGCCAT‑AGC‑CTGTGCAGCGCTCATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGc                                        <  8:257394‑M1/139‑1 (MQ=255)                                                                                                      tGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTg                                    >  6:32569/1‑149 (MQ=255)                                                                                                        gTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTg                                    <  5:32569/147‑1 (MQ=255)                                                                                                         ttctttggccatagcctgtgcagcgctcatggccaAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGc                                            >  4:236863‑M2/36‑140 (MQ=255)                                                                                                         ttctttggccatagcctgtgcagcgctcatggccaAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGc                                            <  3:236863‑M2/105‑1 (MQ=255)                                                                                                            TGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACg                              <  3:190023‑M1/149‑1 (MQ=255)                                                                                                              tggccatagcctgtgcagcgctcatggccaAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCAc                               <  7:257394‑M2/118‑1 (MQ=255)                                                                                                              GCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACgg                             <  8:228912‑M1/148‑1 (MQ=255)                                                                                                              GCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACgg                             >  1:150757‑M1/1‑148 (MQ=255)                                                                                                              GCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACgg                             >  2:222217‑M1/1‑148 (MQ=255)                                                                                                                      cgcTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCAtgt                    <  7:228912/149‑1 (MQ=255)                                                                                                                        cTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGaa                                                 <  2:309794/118‑1 (MQ=255)                                                                                                                        cTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGaa                                                 >  1:309794/1‑118 (MQ=255)                                                                                                                           cacaG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAg               >  1:201174/1‑149 (MQ=255)                                                                                                                            acaG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAgg              <  4:190023/149‑1 (MQ=255)                                                                                                                            acaG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAgg              <  6:265955/149‑1 (MQ=255)                                                                                                                            acaG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAgg              <  7:310376/149‑1 (MQ=255)                                                                                                                                     atggccaAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGGTGTgg        >  2:84391‑M2/8‑148 (MQ=255)                                                                                                                                        gccaAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGgtgt          >  8:105205‑M2/5‑143 (MQ=255)                                                                                                                                        gccaAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGgtgt          >  8:100273‑M2/5‑143 (MQ=255)                                                                                                                                        gccaAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGgtgt          <  7:100273‑M2/139‑1 (MQ=255)                                                                                                                                        gccaAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGgtgt          <  7:105205‑M2/139‑1 (MQ=255)                                                                                                                                          caAAGAAGTTCGCCTTGGTTACGTGGTTGGTTTGGCCGACAGCGTGGCGACCACGAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGGCACGGGAATCa                       <  6:355554‑M2/126‑1 (MQ=255)                                                                                                                                          caAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACgg                             >  1:241692‑M2/3‑122 (MQ=255)                                                                                                                                          caAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACgg                             <  2:241692‑M2/120‑1 (MQ=255)                                                                                                                                          caAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGGTGTGGCAACgg  >  6:53343‑M2/3‑149 (MQ=255)                                                                                                                                          caAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGGTGTGGCAACgg  >  5:248728‑M2/3‑149 (MQ=255)                                                                                                                                            |                                                                                                                                                   TGTGTTGCAGGAAGATGATGCAATCTCCAAGACCTGACGAGGGGATGCTTTGATGGCAACTTTGAAGAAAATGCGACGTTTCCTGGGCGTGGGCACCGCCCTGGTAATGGCCATGAGCGCTGCACAG‑GCT‑ATGGCCAAAGAAGTAAGCATTGGTTACGTGGATGGTTGGGCCGACAGCGTGGCGACCACCAACGTGGCTGCCGAAGTAATCAAGCAAAAACTCGGCTATGACGTGAAGTTGCAGGCCGTGGCCACGGGAATCATGTGGCAGGGTGTGGCAACGG  >  NC_002947/1941410‑1941693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.