New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5456898	42 (0.800)	4 (0.080)	4/246	NT	9.6%	coding (630/2607 nt)	leuS	leucine‑‑tRNA ligase
	?	NC_002947	= 5456990	35 (0.680)					coding (722/2607 nt)	leuS	leucine‑‑tRNA ligase

TCACCGATTACGCCGACGAGCTGCTGGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGCCACCCAGGCTGCGCAGGGCAACCCGGCGCTGCAGGCGTTCATCGATGAGTGC  >  NC_002947/5456852‑5457135                                                                                                                                           |                                                                                                                                                  tCACCGATTACGCCGACGAGCTGCTGGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGAAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACg                                                                                                                                           >  7:78171/1‑147 (MQ=255)   aCCGATTACGCCGACGAGCTGCTGGAGAGCGTTGACGAGCTGCGGGGCTGGCCTGAGCAGGTCAAGACCATTCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGTCCACGAAg                                                                                                                                        <  2:82397/148‑1 (MQ=255)    ccGATTACGCCGACGAGCTGCTGGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAgg                                                                                                                                       >  4:268906/1‑148 (MQ=255)           cGCCGACGAGCTGCTGGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTc                                                                                                                                >  4:2979/1‑148 (MQ=255)             ccGACGAGCTGCTGGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAg                                                                                                                             <  3:2979/149‑1 (MQ=255)                acgaGCTGCTGGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAg                                                                                                                             <  8:1262/146‑1 (MQ=255)                acgaGCTGCTGGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAg                                                                                                                             >  7:1262/1‑146 (MQ=255)                acgaGCTGCTGGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTc                                                                                                                          <  5:339866/149‑1 (MQ=255)                  gaGCTGCTGGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCtt                                                                                                                        <  3:268906/149‑1 (MQ=255)                        ctgGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTcaccac                                                                                                                  <  8:201571/149‑1 (MQ=255)                          ggAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCAccc                                                                                                                >  4:217148/1‑149 (MQ=255)                             gagCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTc                                                                                                             >  3:112764/1‑149 (MQ=255)                                 cTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCgtg                                                                                                         >  1:124303/1‑147 (MQ=255)                                 cTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGa                                                                                                         <  6:299250/149‑1 (MQ=255)                                     aCGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGacac                                                                                                      <  6:184007/148‑1 (MQ=255)                                       gAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCCCGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCt                                                                                                   >  4:40950/1‑149 (MQ=255)                                       gAGCTGACGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCATTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCt                                                                                                   <  8:78171/149‑1 (MQ=255)                                         gCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATcggcagctcgtcaaggctctccagcagctcgtcggcgtaatcggtgatgc                                                                                                 <  7:128525‑M2/149‑51 (MQ=255)                                             ccGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATcggcagctcgtcaaggctctccagcagctcgtcggcgtaatcggtgatgcgg                                                                                               <  4:68088‑M2/147‑53 (MQ=255)                                              cGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGgc                                                                                            <  2:124303/149‑1 (MQ=255)                                               gggCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCg                                                                                                           <  6:118592/133‑1 (MQ=255)                                               gggCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCg                                                                                                           >  5:118592/1‑133 (MQ=255)                                                     gCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCAcc                                                                                      >  7:150949/1‑148 (MQ=255)                                                     gCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCAcc                                                                                      <  3:40950/148‑1 (MQ=255)                                                       cTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTAt                                                                                   >  7:329147/1‑149 (MQ=255)                                                             aGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATgtcgcc                                                                             >  6:221993/1‑149 (MQ=255)                                                               gTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATgtcgc                                                                              >  8:320996/1‑146 (MQ=255)                                                               gTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATgtcgc                                                                              <  7:320996/146‑1 (MQ=255)                                                                tCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATgtcgccgtc                                                                          <  5:221993/149‑1 (MQ=255)                                                                tCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATgtcgccgtc                                                                          >  5:138716/1‑149 (MQ=255)                                                                       cATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCAAAGTCGCCGTCgccgcc                                                                    >  4:285207/1‑148 (MQ=255)                                                                         tGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATcggcagctcgtcaaggctctccagcagctcgtcggcgtaatcggtgatgcggaagtagtacatcgggatttcgcgcttctcg                                                                 >  8:128525‑M2/1‑67 (MQ=255)                                                                                  aCTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTg                                                        <  6:138716/149‑1 (MQ=255)                                                                                      gATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGc                                                      <  3:217148/147‑1 (MQ=255)                                                                                            cAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGCCACCCAgg                                              <  8:329147/149‑1 (MQ=255)                                                                                                tCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGCCACCCAGGCTgc                                          >  7:275321/1‑149 (MQ=255)                                                                                                           ggAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGCCACCCAGGCTGCGCAGGGc                                   >  2:307915/1‑145 (MQ=255)                                                                                                           ggAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGCCACCCAGGCTGCGCAGGGc                                   <  1:307915/145‑1 (MQ=255)                                                                                                            gAAGTCCAGTTCCCGTACGACAAGGCCAGCATcggcagctcgtcaaggctctccagcagctcgtcggcgtaatcggtgatgcggaagtagtacatcgggatttcgcgcttctcgatcagcgcgcccgaacgccagccacggccgtcgat                              >  3:68088‑M2/1‑32 (MQ=255)                                                                                                                             cGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGCCACCCAGGCTGCGCAGGGCAACCCGGCGCTGCAGGCGTTCa             <  4:150888/149‑1 (MQ=255)                                                                                                                                          aTCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGCCACCCAGGCTGCGCAGGGCAACCCGGCGCTGCAGGCGTTCATCGATGAGTGc  >  4:146408/1‑147 (MQ=255)                                                                                                                                           tCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGCCACCCAGGCTGCGCAGGGCAACCCGGCGCTGCAGGCGTTCATCGATGAGTGc  >  4:136209/1‑146 (MQ=255)                                                                                                                                           tCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGCCACCCAGGCTGCGCAGGGCAACCCGGCGCTGCAGGCGTTCATCGATGAGTGc  >  2:209446/1‑146 (MQ=255)                                                                                                                                           |                                                                                                                                                  TCACCGATTACGCCGACGAGCTGCTGGAGAGCCTTGACGAGCTGCCGGGCTGGCCTGAGCAGGTCAAGACCATGCAGCGCAACTGGATCGGCAAATCGCGCGGCATGGAAGTCCAGTTCCCGTACGACAAGGCCAGCATCGGCCACGAAGGCACCCTCAAGGTCTTCACCACCCGTCCGGACACGCTGATGGGCGCCACCTATGTCGCCGTCGCCGCCGAGCACCCGCTGGCCACCCAGGCTGCGCAGGGCAACCCGGCGCTGCAGGCGTTCATCGATGAGTGC  >  NC_002947/5456852‑5457135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.