New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5684994	73 (1.380)	4 (0.080)	4/236	NT	5.8%	coding (1899/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
	?	NC_002947	= 5685031	63 (1.280)					coding (1862/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver

CAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTGCGCCTCGCTGCGAAAAATGCCCAGCAACTGCGGATCGA  >  NC_002947/5684886‑5685175                                                                                                                                                   |                                                                                                                                                  cAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATggcgg                                                                                                                                                   >  6:335732/1‑146 (MQ=255) cAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGACATggcgg                                                                                                                                                   <  5:335732/146‑1 (MQ=255)       cAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGcactgcctt                                                                                                                                          <  6:217187‑M2/149‑10 (MQ=255)        aGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCttt                                                                                                                                         <  1:127380/149‑1 (MQ=255)        aGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCttt                                                                                                                                         >  5:205149/1‑149 (MQ=255)        aGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCttt                                                                                                                                         <  6:205149/149‑1 (MQ=255)          aTGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGa                                                                                                                                       <  7:101321/149‑1 (MQ=255)          aTGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGa                                                                                                                                       <  7:234804/149‑1 (MQ=255)            ggAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAgt                                                                                                                                     >  8:159534/1‑149 (MQ=255)             gAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGTGGGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAgt                                                                                                                                     >  1:87710/1‑149 (MQ=255)             gAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAgt                                                                                                                                     <  5:355306/148‑1 (MQ=255)              aacaacGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAgtgt                                                                                                                                   <  8:133117/149‑1 (MQ=255)                caacGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAgtgtgt                                                                                                                                 >  3:150750/1‑149 (MQ=255)                   cGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCttt                                                                                                                                         <  6:176921/138‑1 (MQ=255)                   cGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCttt                                                                                                                                         >  5:176921/1‑138 (MQ=255)                    gACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGc                                                                                                                               >  2:180940/1‑147 (MQ=255)                      ccGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGcactgcctt                                                                                                                                          >  6:136340‑M2/1‑125 (MQ=255)                      ccGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGcactgcctt                                                                                                                                          <  5:136340‑M2/134‑10 (MQ=255)                       cgcgCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGc                                                                                                                          <  8:296425/149‑1 (MQ=255)                         cgcAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCAc                                                                                                                        >  3:34656/1‑149 (MQ=255)                          gcAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACg                                                                                                                       >  4:241349/1‑149 (MQ=255)                             gCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTg                                                                                                                    <  2:87710/149‑1 (MQ=255)                              ccTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGc                                                                                                                   <  1:180940/149‑1 (MQ=255)                               cTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAgg                                                                                                                           >  4:218046/1‑140 (MQ=255)                               cTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAgg                                                                                                                           <  3:218046/140‑1 (MQ=255)                                tCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCaa                                                                                                                 <  3:241349/149‑1 (MQ=255)                                  cAGCCATTCCATTTCGGCCATTTGCAGT‑GGGAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGt                                                                                                               >  1:28445/1‑149 (MQ=255)                                    gCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCttt                                                                                                                                         <  8:138187/121‑1 (MQ=255)                                    gCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCa                                                                                                             >  5:189768/1‑149 (MQ=255)                                      cattccattTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATc                                                                                                           >  5:240612/1‑149 (MQ=255)                                            attTCGGCCATTTGTAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGAc                                                                                                     >  4:63996/1‑149 (MQ=255)                                                cGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGc                                                                                                 >  3:209816/1‑149 (MQ=255)                                                 ggCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGAAGTGGCCAGTTCGGCCACCGGCATCACCCCGGCCATGGCGGCACTGCCGTTGAGTGTGTGCAAGGCACGCTCCAAGTCATCACTGACCCGc                                                                                                 >  8:136991/1‑148 (MQ=255)                                                  gCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCgt                                                                                               >  2:48600/1‑149 (MQ=255)                                                     aTTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTc                                                                                            <  4:34656/149‑1 (MQ=255)                                                     aTTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTc                                                                                            <  6:240612/149‑1 (MQ=255)                                                          cAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCg                                                                                                          <  7:269135/130‑1 (MQ=255)                                                          cAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCg                                                                                                          >  8:269135/1‑130 (MQ=255)                                                               ggCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGc                                                                                                                          <  5:299498/110‑1 (MQ=255)                                                               ggCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGc                                                                                                                          <  1:126942/110‑1 (MQ=255)                                                               ggCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGc                                                                                                                          >  2:126942/1‑110 (MQ=255)                                                               ggCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGc                                                                                                                          >  6:299498/1‑110 (MQ=255)                                                                      gATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCaa                                                                                                                 >  2:285197/1‑112 (MQ=255)                                                                      gATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCaa                                                                                                                 <  1:285197/112‑1 (MQ=255)                                                                      gATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCt                                                                             <  4:150750/148‑1 (MQ=255)                                                                          gCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGc                                                                         <  4:209816/148‑1 (MQ=255)                                                                            ccTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTg                                                                          >  5:206434/1‑145 (MQ=255)                                                                            ccTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCa                                                                        >  3:171838/1‑147 (MQ=255)                                                                            ccTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCa                                                                        <  4:171838/147‑1 (MQ=255)                                                                                gTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGccgccg                                                                                  <  5:215126/133‑1 (MQ=255)                                                                                gTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGccgccg                                                                                  >  6:215126/1‑133 (MQ=255)                                                                                gTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATa                                                                    <  5:217187/147‑1 (MQ=255)                                                                                   cTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTg                                                                                         >  8:214620/1‑123 (MQ=255)                                                                                    tCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCaa                                                                                                                 <  7:264976/98‑1 (MQ=255)                                                                                    tCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCaa                                                                                                                 >  8:264976/1‑98 (MQ=255)                                                                                      aCGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTc                                                              <  1:48600/147‑1 (MQ=255)                                                                                      aCGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGCCGTGGCCGCCGGTGCTTTGCAGATAAACCTCaa                                                            <  6:189768/149‑1 (MQ=255)                                                                                      aCGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGACATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGc                                                                         <  5:217347/136‑1 (MQ=255)                                                                                      aCGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGACATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGc                                                                         >  6:217347/1‑136 (MQ=255)                                                                                                 ggTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGcactgccttcgaccgcctggcccgtgagtacaagggccatcaactgccactgcaaatggccgaaatggaatggctggaggctgcgcggtc                                                         >  7:294344‑M2/1‑51 (MQ=255)                                                                                                 ggTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGcactgccttcgaccgcctggcccgtgagtacaagggccatcaactgccactgcaaatggccgaaatggaatggctggaggctgcgcggtc                                                         <  8:294344‑M2/141‑91 (MQ=255)                                                                                                 ggTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCa                                                                        <  4:329660/126‑1 (MQ=255)                                                                                                 ggTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCa                                                                        >  3:329660/1‑126 (MQ=255)                                                                                                  gTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGACCAGAt                                                >  4:163837/1‑149 (MQ=255)                                                                                                   tCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGcactgccttcgaccgcctggcccgtgagtacaagggccatcaactgccactgcaaatggccgaaatggaatggctggaggctgcgcggtcgttgttccat                                               <  5:163172‑M2/149‑101 (MQ=255)                                                                                                   tCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGcc                                                    <  3:213703/144‑1 (MQ=255)                                                                                                   tCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGcc                                                    >  4:213703/1‑144 (MQ=255)                                                                                                      aaGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑cc                                           >  1:141348/1‑149 (MQ=255)                                                                                                       aGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCaa                                                            >  8:142511/1‑132 (MQ=255)                                                                                                       aGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCaa                                                            <  7:142511/132‑1 (MQ=255)                                                                                                          cAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTgc                                       <  3:63996/149‑1 (MQ=255)                                                                                                          cAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTgc                                       <  6:206434/149‑1 (MQ=255)                                                                                                            gTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGACCAGATGG‑CCCTgcgc                                     <  3:163837/149‑1 (MQ=255)                                                                                                                  aGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCgt                                                                                               <  3:170545/86‑1 (MQ=255)                                                                                                                  aGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCgt                                                                                               >  4:170545/1‑86 (MQ=255)                                                                                                                  aGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTGCGCCTCGCt                               >  5:354529/1‑149 (MQ=255)                                                                                                                       ggCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTGCGCCTCGCTGCGa                           >  5:187704/1‑148 (MQ=255)                                                                                                                        gCCACCGGCATCACACCGGCCATGGCGGcactgccttcgaccgcctggcccgtgagtacaagggccatcaactgccactgcaaatggccgaaatggaatggctggaggctgcgcggtcgttgttccatctgggcttggcgcaactcgat                          >  6:163172‑M2/1‑28 (MQ=255)                                                                                                                            ccGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTGCGCCTCGCTGCGAAAAATg                     <  6:354529/149‑1 (MQ=255)                                                                                                                             cGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTGCGCCTCGCTGCGAAAAATGc                    <  2:141348/149‑1 (MQ=255)                                                                                                                                  tCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGGTCCCTGCGCCTCGCTGCGAAAAATGcc                   <  1:3476/146‑1 (MQ=255)                                                                                                                                  tCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTGCGCCTCGCTGCGAAAAATGcc                   >  2:3476/1‑145 (MQ=255)                                                                                                                                        cGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTGCGCCTCGCTGCGAAAAATGCCCAGCAACTGc         >  2:40560/1‑149 (MQ=255)                                                                                                                                                gcggcACTGCCTTTGAGTGTGTGCAAGGCACGCTGCTAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTGCGCCTCGCTGCGAAAAATGCCCAGCAACTGCGGATCGa  <  7:159534/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                  CAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTTGCAGT‑GGCAGTTGATGGCCCTTGTACTCACGGGCCAGGCGGTCGAAGGCAGTGGCCAGTTCGGCCACCGGCATCACACCGGCCATGGCGGCACTGCCTTTGAGTGTGTGCAAGGCACGCTGCAAGTCATCGCTGACCGGCGTGTCGTGGCCGCCGGTGCTTTGCAGATAAACCTCAAGGCTGGCCAGATGG‑CCCTGCGCCTCGCTGCGAAAAATGCCCAGCAACTGCGGATCGA  >  NC_002947/5684886‑5685175

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.