New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	231515 =	55 (0.930)	3 (0.050)	3/250	NT	5.4%	coding (1176/1419 nt)	PP_0179	putative efflux transporter
	?	NC_002947	231546 =	52 (0.930)					coding (1207/1419 nt)	PP_0179	putative efflux transporter

ACGCATATCGGTGTAGGTTCGCGTGGCCTGCAAATCCGCCAGGAACGACTCACGCCCTGCCTGGTAATACCGGTGCGTCTGGTCCGCGGCTTCCTTCGCCGACTTCTCCGCCTCGGCCAGCGCATCGCGCCGATC‑GAGCAAGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/231662‑231515 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGAT  >  NC_002947/231546‑231656                                                                                                                                                                                                                                                                      ACGCATATCGGTGTAGGTTCGCGTGGCCTGCAAATCCGCCAGGAACGACTCACGCCCTGCCTGGTAATACCGGTGCGTCTGGTCCGCGGCTTCCTTCGCCGACTTCTCCGCCTCGGCCAGCGCATCGCGCCGATC‑GAGCAAGGCGCTG                                                                                                                 >  2:273099/1‑148              TAGGTTCGCGTGGCCTGCAAATCCGCCAGGAACGACTCACGCCCTGCCTGGTAATACCGGTGCGTCTGGTCCGCGGCTTCCTTCGCCGACTTCTCCGCCTCGGCCAGCGCCTTGC‑TCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAA                                                                                                   <  2:110094/149‑1                                                                                                               CCTCGGCCAGCGCATCGCGCCGATC‑GAGCAAGGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGAT  <  1:110094/149‑1                                                                                                               CCTCGGCCAGCGCATCGCGCCGATC‑GAGCAAGGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGA   >  4:9517/1‑148                                                                                                                                                                                                                                                                      ACGCATATCGGTGTAGGTTCGCGTGGCCTGCAAATCCGCCAGGAACGACTCACGCCCTGCCTGGTAATACCGGTGCGTCTGGTCCGCGGCTTCCTTCGCCGACTTCTCCGCCTCGGCCAGCGCATCGCGCCGATC‑GAGCAAGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/231662‑231515 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGAT  >  NC_002947/231546‑231656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.