New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	231515 =	55 (0.930)	3 (0.050)	3/250	NT	5.4%	coding (1176/1419 nt)	PP_0179	putative efflux transporter
	?	NC_002947	231546 =	52 (0.930)					coding (1207/1419 nt)	PP_0179	putative efflux transporter

CACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGTTGGCTGCAGCCAATAGTCAAGTGGC  >  NC_002947/231404‑231694                                                                                                                                                |                                                                                                                                                      cACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAgg                                                                                                                                                 >  2:150023/1‑149 (MQ=255) atcggtgtaggttcgcgtggcctgcaaatccgccaggaacgactcacgccctgcctggtaataccggtgcgtctggtccgcggcttccttcgccgacttctccgcctcggcCAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAgg                                                                                                                                                 <  1:110094‑M1/38‑1 (MQ=255)  tcggtgtaggttcgcgtggcctgcaaatccgccaggaacgactcacgccctgcctggtaataccggtgcgtctggtccgcggcttccttcgccgacttctccgcctcggcCAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAgg                                                                                                                                                 >  4:9517‑M1/111‑148 (MQ=255)     cGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCg                                                                                                                                               >  2:76955/1‑147 (MQ=255)         taggttcgcgtggcctgcaaatccgccaggaacgactcacgccctgcctggtaataccggtgcgtctggtccgcggcttccttcgccgacttctccgcctcggccagcgccttgctcgatcggcgcgatgcgctgGCCGAGGCGGAGaa                                                                                                                                          <  2:110094‑M2/14‑1 (MQ=255)         cccGCCTTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGaa                                                                                                                                          <  8:302755/148‑1 (MQ=255)         cccGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGaa                                                                                                                                          <  7:322724/148‑1 (MQ=255)          ccGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGt                                                                                                                                        >  3:77432/1‑149 (MQ=255)           cGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTc                                                                                                                                       >  8:259943/1‑149 (MQ=255)            gCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATCGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCg                                                                                                                                      >  8:173037/1‑149 (MQ=255)             cATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCgg                                                                                                                                     <  1:150023/149‑1 (MQ=255)              aTTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGc                                                                                                                                    <  2:203435/149‑1 (MQ=255)                tCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGTGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCg                                                                                                                                   >  8:156433/1‑148 (MQ=255)                           aGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCcgcg                                                                                                                      <  7:173037/149‑1 (MQ=255)                              ccTCGACCCAGGCGGCCCTGGCTCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGAc                                                                                                                   <  8:105363/149‑1 (MQ=255)                               cTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGAcc                                                                                                                  >  8:330152/1‑149 (MQ=255)                               cTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGAc                                                                                                                   >  6:329051/1‑148 (MQ=255)                                tCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGa                                                                                                                    >  6:332422/1‑146 (MQ=255)                                tCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGa                                                                                                                    <  5:332422/146‑1 (MQ=255)                                  gACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGTGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGa                                                                                                               <  7:156433/149‑1 (MQ=255)                                  gACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGa                                                                                                               <  7:13163/149‑1 (MQ=255)                                    cccAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACg                                                                                                             >  2:334352/1‑149 (MQ=255)                                       aGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGACTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCAc                                                                                                          >  1:105362/1‑149 (MQ=255)                                         gcggcCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCg                                                                                                        <  8:305540/149‑1 (MQ=255)                                         gcggcCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCg                                                                                                        <  1:775/149‑1 (MQ=255)                                            gcCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTa                                                                                                     <  3:163924/149‑1 (MQ=255)                                              ccTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCTGCGGACCAGACGCACCGGTAt                                                                                                    >  4:352343/1‑148 (MQ=255)                                              ccTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCg                                                                                                        >  2:293421/1‑144 (MQ=255)                                              ccTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCg                                                                                                        <  1:293421/144‑1 (MQ=255)                                               cTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTa                                                                                                  >  4:29824/1‑149 (MQ=255)                                                  gcgcACTTCGATGGCGTGGTGCTGAACGCCTTTCGCGAGAGCCAGTCCGGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGGTATGCGATGTCCGAGGAGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCTGTATTAcc                                                                                                <  6:96828/148‑1 (MQ=255)                                                    gcACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACca                                                                                               >  5:114214/1‑147 (MQ=255)                                                    gcACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACca                                                                                               <  6:114214/147‑1 (MQ=255)                                                          cGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACcaggcagg                                                                                         <  2:299307/147‑1 (MQ=255)                                                            aTGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGt                                                                                     <  7:330152/149‑1 (MQ=255)                                                             tGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGAGCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGACAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGt                                                                                     <  1:76955/149‑1 (MQ=255)                                                               gCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGGGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGa                                                                                   <  4:77432/148‑1 (MQ=255)                                                                          aaCGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGc                                                                       <  7:259943/149‑1 (MQ=255)                                                                             gCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGa                                                                    >  1:273099/1‑149 (MQ=255)                                                                                   cgcgAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGc                                                               <  1:54996/148‑1 (MQ=255)                                                                                         acccagacccGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCAc                                                        <  5:329051/149‑1 (MQ=255)                                                                                           ccagacccGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCAcgc                                                      >  8:210397/1‑149 (MQ=255)                                                                                           ccagacccGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGGATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCAcgc                                                      >  7:347189/1‑149 (MQ=255)                                                                                                 ccGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAAcc                                                 >  7:140904/1‑148 (MQ=255)                                                                                                  ttctccgcctcggcCAGCGCATCGCGCCGATCGA‑GCAAGGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTa                                               <  2:110094‑M1/135‑1 (MQ=255)                                                                                                   ggCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTa                                               >  7:13735/1‑148 (MQ=255)                                                                                                          cctcggccagcgcatcgcgccgatcgagcaaggcgctgGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGat                                        <  1:110094‑M2/111‑1 (MQ=255)                                                                                                          cctcggccagcgcatcgcgccgatcgagcaaggcgctgGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGa                                         >  4:9517‑M2/39‑148 (MQ=255)                                                                                                          acaGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGata                                       >  2:205788/1‑149 (MQ=255)                                                                                                              tACAGCGCCTTGCTC‑GATAGGCGCGATGCGCTGGACGAGGCGGAGAAGTCGGAGA‑AGGAAGCCGCGGACCAGACGAAACGGTATTACCAGGCAGGGCGTGAGTAGTTCATGGCGGATTTGCAGGAAACGCGAACATACACAGatatcat                                   >  3:269920/1‑146 (MQ=255)                                                                                                                CAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATAtgcgt                                  >  2:273099‑M1/1‑148 (MQ=255)                                                                                                                       ttGGTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGCCCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGtt                          >  4:304114/1‑149 (MQ=255)                                                                                                                        tGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACAACGATATGCGTGCGCAGTTg                         >  6:334432/1‑149 (MQ=255)                                                                                                                         gCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGtt                          <  8:140904/147‑1 (MQ=255)                                                                                                                          cTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCTAACCTACACCGATATGCGTGCGCAGTTGGc                       <  2:105362/149‑1 (MQ=255)                                                                                                                               aTCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGTTGGCTg                     >  4:283655/1‑147 (MQ=255)                                                                                                                                  ggCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGTTGGCTGCAGc                 >  4:12921/1‑148 (MQ=255)                                                                                                                                   gcgcGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑GGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGTTGGCTGCAGcc                >  1:278664/1‑148 (MQ=255)                                                                                                                                   gcgcGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGTTGGCTGCAGcc                >  2:205626/1‑148 (MQ=255)                                                                                                                                      cgATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGTTGGCTGCAGCCAATa            <  8:347189/149‑1 (MQ=255)                                                                                                                                        aTGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGTTGGCTGCAGCCAATAGt          <  3:29824/149‑1 (MQ=255)                                                                                                                                                gCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGTTGGCTGCAGCCAATAGTCAAGTGgc  >  6:315041/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                      CACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGTGGTGCTGAACGCCATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTC‑GATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGA‑AGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGTGCGCAGTTGGCTGCAGCCAATAGTCAAGTGGC  >  NC_002947/231404‑231694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.