New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 231515 =55 (0.930)3 (0.050) 3/250 NT 5.4% coding (1176/1419 nt) PP_0179 putative efflux transporter
?NC_002947 231546 = 52 (0.930)coding (1207/1419 nt) PP_0179 putative efflux transporter

GCAGATCAGCTGGAGCATCCCCACCAACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGT  >  NC_002947/231374‑231662
                                                                                                                                                 |                                                                                                                                                     
gCAGATCAGCTGGAGCATCCCCACCAACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCt                                                                                                                                                <  1:170321/149‑1 (MQ=255)
  aGATCAGCTGGAGCATCCCCACCAACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTg                                                                                                                                              <  2:329955/149‑1 (MQ=255)
    aTCAGCTGGAGCATCCCCACCAACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCt                                                                                                                                            <  3:181640/149‑1 (MQ=255)
        gCTGGAGCATCCCCACCAACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGAt                                                                                                                                       >  2:54996/1‑149 (MQ=255)
         cTGGAGCATCCCCACCAACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATc                                                                                                                                      <  6:219304/149‑1 (MQ=255)
              gCATCCCCACCAACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGgcgc                                                                                                                                 >  7:305540/1‑149 (MQ=255)
                   cccACCAACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATgc                                                                                                                            >  8:13163/1‑149 (MQ=255)
                     caccaACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGTTTAGGGTGCTGAACGCTGCATTCGCGAGACCCAGACCCGGCTGGCACAGTACCGCGCCTTGCTCGATCGGCGCGAt                                                                                                                              >  1:299307/1‑149 (MQ=255)
                     caccaACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCCGCAGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATgccc                                                                                                                          >  5:96828/1‑147 (MQ=255)
                       ccaACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTg                                                                                                                        <  8:319835/149‑1 (MQ=255)
                              cACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAgg                                                                                                                 >  2:150023/1‑149 (MQ=255)
                                  cGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCg                                                                                                               >  2:76955/1‑147 (MQ=255)
                                  atcggtgtaggttcgcgtggcctgcaaatccgccaggaacgactcacgccctgcctggtaataccggtgcgtctggtccgcggcttccttcgccgacttctccgcctcggcCAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAgg                                                                                                                 <  1:110094‑M1/38‑1 (MQ=255)
                                   tcggtgtaggttcgcgtggcctgcaaatccgccaggaacgactcacgccctgcctggtaataccggtgcgtctggtccgcggcttccttcgccgacttctccgcctcggcCAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAgg                                                                                                                 >  4:9517‑M1/111‑148 (MQ=255)
                                      cccGCCTTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGaa                                                                                                          <  8:302755/148‑1 (MQ=255)
                                      cccGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGaa                                                                                                          <  7:322724/148‑1 (MQ=255)
                                       ccGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGt                                                                                                        >  3:77432/1‑149 (MQ=255)
                                        cGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTc                                                                                                       >  8:259943/1‑149 (MQ=255)
                                         gCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATCGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCg                                                                                                      >  8:173037/1‑149 (MQ=255)
                                          cATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCgg                                                                                                     <  1:150023/149‑1 (MQ=255)
                                           aTTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGc                                                                                                    <  2:203435/149‑1 (MQ=255)
                                             tCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGTGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCg                                                                                                   >  8:156433/1‑148 (MQ=255)
                                                 aTGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCt                                                                                                                                            >  3:228293/1‑104 (MQ=255)
                                                 aTGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCt                                                                                                                                            <  4:228293/104‑1 (MQ=255)
                                                        aGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCcgcg                                                                                      <  7:173037/149‑1 (MQ=255)
                                                           ccTCGACCCAGGCGGCCCTGGCTCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGAc                                                                                   <  8:105363/149‑1 (MQ=255)
                                                            cTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGAcc                                                                                  >  8:330152/1‑149 (MQ=255)
                                                            cTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGAc                                                                                   >  6:329051/1‑148 (MQ=255)
                                                             tCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGa                                                                                    <  5:332422/146‑1 (MQ=255)
                                                             tCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGa                                                                                    >  6:332422/1‑146 (MQ=255)
                                                               gACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGTGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGa                                                                               <  7:156433/149‑1 (MQ=255)
                                                               gACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGa                                                                               <  7:13163/149‑1 (MQ=255)
                                                                 cccAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACg                                                                             >  2:334352/1‑149 (MQ=255)
                                                                    aGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGACTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCAc                                                                          >  1:105362/1‑149 (MQ=255)
                                                                      gcggcCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCg                                                                        <  8:305540/149‑1 (MQ=255)
                                                                      gcggcCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCg                                                                        <  1:775/149‑1 (MQ=255)
                                                                         gcCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTa                                                                     <  3:163924/149‑1 (MQ=255)
                                                                           ccTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCTGCGGACCAGACGCACCGGTAt                                                                    >  4:352343/1‑148 (MQ=255)
                                                                           ccTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCg                                                                        >  2:293421/1‑144 (MQ=255)
                                                                           ccTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCg                                                                        <  1:293421/144‑1 (MQ=255)
                                                                            cTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTa                                                                  >  4:29824/1‑149 (MQ=255)
                                                                               gcgcACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CTTTCGCGAGAGCCAGTCCGGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGGTATGCGATGTCCGAGGAGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCTGTATTAcc                                                                <  6:96828/148‑1 (MQ=255)
                                                                                 gcACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACca                                                               >  5:114214/1‑147 (MQ=255)
                                                                                 gcACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACca                                                               <  6:114214/147‑1 (MQ=255)
                                                                                       cGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACcaggcagg                                                         <  2:299307/147‑1 (MQ=255)
                                                                                         aTGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGt                                                     <  7:330152/149‑1 (MQ=255)
                                                                                          tGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGAGCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGACAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGt                                                     <  1:76955/149‑1 (MQ=255)
                                                                                            gCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGGGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGa                                                   <  4:77432/148‑1 (MQ=255)
                                                                                                         aaCGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGc                                       <  7:259943/149‑1 (MQ=255)
                                                                                                            gC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGa                                    >  1:273099/1‑149 (MQ=255)
                                                                                                                    cgcgAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGc                               <  1:54996/148‑1 (MQ=255)
                                                                                                                          acccagacccGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCAc                        <  5:329051/149‑1 (MQ=255)
                                                                                                                            ccagacccGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCAcgc                      >  8:210397/1‑149 (MQ=255)
                                                                                                                            ccagacccGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGGATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCAcgc                      >  7:347189/1‑149 (MQ=255)
                                                                                                                                  ccGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAAcc                 >  7:140904/1‑148 (MQ=255)
                                                                                                                                   ttctccgcctcggcCAGCGCATCGCGCCGATCGAGCAAGGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTa               <  2:110094‑M1/135‑1 (MQ=255)
                                                                                                                                    ggCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTa               >  7:13735/1‑148 (MQ=255)
                                                                                                                                           acaGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGata       >  2:205788/1‑149 (MQ=255)
                                                                                                                                               tACAGCGCCTTGCTCGATAGGCGCGATGCGCTGGACGAGGCGGAGAAGTCGGAGAAGGAAGCCGCGGACCAGACGAAACGGTATTACCAGGCAGGGCGTGAGTAGTTCATGGCGGATTTGCAGGAAACGCGAACATACACAGatatcat   >  3:269920/1‑146 (MQ=255)
                                                                                                                                                 CAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATAtgcgt  >  2:273099‑M1/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                                     
GCAGATCAGCTGGAGCATCCCCACCAACGGCACCCGTGCCCGCATTCGCATGGCCGAGGCCTCGACCCAGGCGGCCCTGGCGCACTTCGATGGCGT‑‑GGTGCTGAACGC‑‑CATTCGCGAGACCCAGACCCGGCTGGCACAGTACAGCGCCTTGCTCGATCGGCGCGATGCGCTGGCCGAGGCGGAGAAGTCGGCGAAGGAAGCCGCGGACCAGACGCACCGGTATTACCAGGCAGGGCGTGAGTCGTTCCTGGCGGATTTGCAGGCCACGCGAACCTACACCGATATGCGT  >  NC_002947/231374‑231662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.