| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 346558 = | 73 (1.240) | 4 (0.070) | 4/248 | NT | 6.3% | coding (1288/2247 nt) | PP_0287 | hypothetical protein |
| ? | NC_002947 | 346651 = | 49 (0.880) | coding (1195/2247 nt) | PP_0287 | hypothetical protein | |||||
TTTCGCCAAACAAGCCCTGCGCCTGCAACTTAAGGGCGACACCTTCGACGCCGACCGCTACCTGCCGGCCAAGAGCGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/346712‑346558‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcaGGTAGCGGTCGGCGTCGAAGGTGTCGCCCTTAAGTTGCAGGCGCAGGGCTTGTTTGGCGAAATCTTCGACGGCCACGCGGCCGCTGAAGGTGCTGTCGTCCAGCTTCACCGCCAGGTCTTCCAGGGCCAGGCTGCTGGGTGTG > NC_002947/346651‑346793 TTTCGCCAAACAAGCCCTGCGCCTGCAACTTAAGGGCGACACCTTCGACGCCGACCGCTACCTGCCGGCCAAGAGCGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTG > 1:14464/1‑149TTTCGCCAAACAAGCCCTGCGCCTGCAACTTAAGGGCGACACCTTCGACGCCGACCGCTACCTGCCGGCCAAGAGCGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTG > 1:188692/1‑149 TCGCCAAACAAGCCCTGCGCCTGCAACTTAAGGGCGACACCTTCGACGCCGACCGCTACCTGCCGGCCAAGAGCGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTGC < 8:143059/148‑1 CCAAACAAGCCCTGCGCCTGCAACTTAAGGGCGACACCTTCGACGCCGACCGCTACCTGCCGGCCAAGAGCGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTGCCGG > 3:126002/1‑148 CCAAACAAGCCCTGCGCCTGCAACTTAAGGGCGACACCTTCGACGCCGACCGCTACCTGCCGGCCAAGAGCGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTGCC > 5:86197/1‑146 CCAAACAAGCCCTGCGCCTGCAACTTAAGGGCGACACCTTCGACGCCGACCGCTACCTGCCGGCCAAGAGCGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTGCC < 6:86197/146‑1 CCTGCCGGCCAAGAGCGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTGCCGGCAGGTAGCGGTCGGCGTCGAAGGTGTCGCCCTTAAGTTGCAGGCGCAGGGCTTGTT > 1:185078/1‑149 GCCGGCCAAGAGCGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTGCCGGCAGGTAGCGGTCGGCGTCGAAGGTGTCGCCCTTAAGTTGCAGGCGCAGGGCTTGTTTGG > 7:129209/1‑149 CGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTGCCGGCAGGTAGCGGTCGGCGTCGAAGGTGTCGCCCTTAAGTTGCAGGCGCAGGGCTTGTTTGGCGAAATCTTCGA < 8:129209/149‑1 GCCAGCGCCGTAGCCGGTGCCGGCAGGTAGCGGTCGGCGTCGAAGGTGTCGCCCTTAAGTTGCAGGCGCAGGGCTTGTTTGGCGAAATCTTCGACGGCCACGCGGCCGCTGAAGGTGCTGTCGTCCAGCTTCACCGCCAGGTCTTCCAG < 2:185078/149‑1 GCCGGCAGGTAGCGGTCGGCGTCGAAGGTGTCGCCCTTAAGTTGCAGGCGCAGGGCTTGTTTGGCGAAATCTTCGACGGCCACGCGGCCGCTGAAGGTGCTGTCGTCCAGCTTCACCGCCAGGTCTTCCAGGGCCAGCCTGCTGGGcac < 7:78812/149‑4 CCGGCAGGTAGCGGTCGGCGTCGAAGGTGTCGCCCTTAAGTTGCAGGCGCACGGCTTGTTTGGCGAAATCTTCGACGGCCACGCGGCCGCTGAAGGTGCTGTCGTCCAGCTTCACCGCCAGGTCTTCCACGGCCAGGCTGCTGGGTGTG < 2:79120/149‑1 TTTCGCCAAACAAGCCCTGCGCCTGCAACTTAAGGGCGACACCTTCGACGCCGACCGCTACCTGCCGGCCAAGAGCGAAGAAGCCAAGGGCGCCACCGCTGCGCGCCAGGCCGAGGTCAAGCAACAAGAGGCCAGCGCCGTAGCCGGTGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/346712‑346558‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcaGGTAGCGGTCGGCGTCGAAGGTGTCGCCCTTAAGTTGCAGGCGCAGGGCTTGTTTGGCGAAATCTTCGACGGCCACGCGGCCGCTGAAGGTGCTGTCGTCCAGCTTCACCGCCAGGTCTTCCAGGGCCAGGCTGCTGGGTGTG > NC_002947/346651‑346793 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |