New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 400298	61 (1.040)	3 (0.050)	3/254	NT	6.1%	intergenic (+33/‑117)	PP_0333/PP_0334	hypothetical protein/transposase
	?	NC_002947	= 400367	34 (0.600)					intergenic (+102/‑48)	PP_0333/PP_0334	hypothetical protein/transposase

GTGGACCGCAGCAACTTCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCTGATCTGAAGCGTGCGCCATACAATGTAATCGATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/400152‑400298 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggTCTCGCCCTCGCTGCCGTTGGCTTCTTCGAACACCACCGTGGCACTGTGATGCCTCGGCGGGGGCGAGTCCATCGATTACATTGTATGGCGCACGCTTCAGATCAGCACCCTGGCTTGCCAGCAGTGAACTTCTTCGCCGGGTTGACC  <  NC_002947/400367‑400220                                                                                                                                                                                                                                                                                                         GTGGACCGCAGCAACTTCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCTGATCTGAAGCGTGCGCCATACAATGTAATCGAT                                                                                                                                                        <  2:338420/145‑1                                                           TCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCTGATCTGAAGCGTGCGCCATACAATGTAATCGATGGTCTCGCCCTCGCTGCCGTTGGCTTCTTCGAACACCACCGTGGCACTGTGATGCCTCGGCG                                                                                          >  2:298065/1‑149                                                           TCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCTGATCTGAAGCGTGCGCCATACAATGTAATCGATGGTCTCGCCCTCGCTGCCGTTGGCTTCTTCGAACACCACCGTGGCACTGTGATGCCTCGGC                                                                                           <  3:104386/148‑1                                                                    CGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCTGATCTGAAGCGTGCGCCATACAATGTAATCGATGGTCTCGCCCTCGCTGCCGTTGGCTTCTTCGAACACCACCGTGGCACTGTGATGCCTCGGCGGGGGCGAGT                                                                                 <  1:298065/149‑1                                                                                                                                                ATGGTCTCGCCCTCGCTGCCGTTGGCTTCTTCGAACACCACCGTGGCACTGTGATGCCTCGGCGGGGGCGAGTCCATCGATTACATTGTATGGCGCACGCTTCAGATCAGCACCCTGGCTTGCCAGCAGTGAACTTCTTCGCCGGGTT      >  1:78497/1‑148                                                                                                                                                ATGGTCTCGCCCTCGCTGCCGTTGGCTTCTTCGAACACCACCGTGGCACTGTGATGCCTCGGCGGGGGCGAGTCCATCGATTACATTGTATGGCGCACGCTTCAGATCAGCACCCTGGCTTGCCAGCAGTGAACTTCTTCGCCGGGTT      <  8:284157/148‑1                                                                                                                                                   GTCTCGCCCTCGCTGCCGTTGGCTTCTTCGAACACCACCGAGGCACTGTGATGCCTCGGCGGGGGCGAGTCCATCGATTACATTGTATGGCGCACGCTTCAGATCAGCACCCTGGCTTGCCAGCAGTGAACTTCTTCGCCGGGTTGACC  <  2:340880/149‑1                                                                                                                                                                                                                                                                                                         GTGGACCGCAGCAACTTCAACTACCCGCTGCTGGTGGGTTCCAAGGCGCTGCGCGAGTTCAAGGCGGCGGTCAACCCGGCGAAGAAGTTCACTGCTGGCAAGCCAGGGTGCTGATCTGAAGCGTGCGCCATACAATGTAATCGATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/400152‑400298 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggTCTCGCCCTCGCTGCCGTTGGCTTCTTCGAACACCACCGTGGCACTGTGATGCCTCGGCGGGGGCGAGTCCATCGATTACATTGTATGGCGCACGCTTCAGATCAGCACCCTGGCTTGCCAGCAGTGAACTTCTTCGCCGGGTTGACC  <  NC_002947/400367‑400220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.