New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 83426349 (0.830)3 (0.050) 3/244 NT 6.2% coding (939/1023 nt) PP_0717 membrane protein
?NC_002947 = 834286 45 (0.820)coding (962/1023 nt) PP_0717 membrane protein

GGCTCGGCGCCTGTACCAGGCGGTGCCGAGCCGGCAGAGCCCGGCGTACTGGGTCAGTTGCCTGACGACCATGTTGATCTTGCTGGGGCAGTCGGTGCAGGACAGTGCAGGTGGGCAGGATGTGTACAAGGCATTTGCGGTGCGTATGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/834110‑834263
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgctgGCATACACCGACACCGCCAGAAACAGCGCCATACGCACCGCAAATGCCTTGTACACATCCTGCCCACCTGCACTGTCCTGCACCGACTGCCCCAGCAAGATCAACATGGTCGTCAGGCAACTGACCCAGTACGCCGGGCTCT  <  NC_002947/834286‑834145
                                                                                                                                                                                                                                                                                                        
GGCTCGGCGCCTGTACCAGGCGGTGCCGAGCCGGCAGAGCCCGGCGTACTGGGTCAGTTGCCTGACGACCATGTTGATCTTGCTGGGGCAGTCGGTGCAGGACAGTGCAGGTGGGCAGGATGTGTACAAGGCATTTGCGGTGCGTATGG                                                                                                                                                     <  3:137182/149‑1
   TCGGCGCCTGTACCAGGCGGTGCCGAGCCGGCAGAGCCCGGCGTACTGGGTCAGTTGCCTGACGACCATGTTGATCTTGCTGGGGCAGTCGGTGCAGGACAGTGCAGGTGGGCAGGATGTGTACAAGGCATTTGCGGTGCGTATGGCGC                                                                                                                                                  >  6:334146/1‑149
     GGCGCCTGTACCAGGCGGTGCCGAGCCGGCAGAGCCCGGCTTACTGGGTCAGTTGCCTGACGACCATGTTGATCTTGCTGGGGCAGTCGGTGCAGGACAGTGCAGGTGGGCAGGATGTGTACAAGGCATTTGCGGTGCGTATGGCGCT                                                                                                                                                 <  2:348648/148‑1
                                         CGGCGTACTGGGTCAGTTGCCTGACGACCATGTTGATCTTGCTGGGGCAGTCGGTGCAGGACAGTGCAGGTGGGCAGGATGTGTACAAGGCATTTGCGGTGCGTATGGCGCTGGCATACACCGACACCGCCAGAAACAGCGCCATACGC                                                                                                            <  6:242307/149‑1
                                                                    CCATGTTGATCTTGCTGGGGCAGTCGGTGCAGGACAGTGCAGGTGGGCAGGATGTGTACAAGGCATTTGCGGTGCGTATGGCGCTGGCATACACCGACACCGCCAGAAACAGCGCCATA                                                                                                               >  5:364400/1‑119
                                                                    CCATGTTGATCTTGCTGGGGCAGTCGGTGCAGGACAGTGCAGGTGGGCAGGATGTGTACAAGGCATTTGCGGTGCGTATGGCGCTGGCATACACCGACACCGCCAGAAACAGCGCCATA                                                                                                               <  6:364400/119‑1
                                                                                                                                                    GCGCTGGCATACACCGACACCGCCAGAAACAGCGCCATACGCACCGCAAATGCCTTGTACACATCCTGCCCACCTGCACTGTCCTGCACCGACTGCCCCAGCAAGATCAACATGGTCGTCAGGCAACTGACCCAGTACGCCGGGCTCT  <  4:317421/148‑1
                                                                                                                                                      GCTGGCATACACCGACACCGCCAGAAACAGCGCCATACGCACCGCAAATGCCTTGTACACATCCTGCCCACCTGCACTGTCCTGCACCGACTGC                                                      >  3:299474/1‑94
                                                                                                                                                      GCTGGCATACACCGACACCGCCAGAAACAGCGCCATACGCACCGCAAATGCCTTGTACACATCCTGCCCACCTGCACTGTCCTGCACCGACTGC                                                      <  4:299474/94‑1
                                                                                                                                                                                                                                                                                                        
GGCTCGGCGCCTGTACCAGGCGGTGCCGAGCCGGCAGAGCCCGGCGTACTGGGTCAGTTGCCTGACGACCATGTTGATCTTGCTGGGGCAGTCGGTGCAGGACAGTGCAGGTGGGCAGGATGTGTACAAGGCATTTGCGGTGCGTATGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/834110‑834263
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcgctgGCATACACCGACACCGCCAGAAACAGCGCCATACGCACCGCAAATGCCTTGTACACATCCTGCCCACCTGCACTGTCCTGCACCGACTGCCCCAGCAAGATCAACATGGTCGTCAGGCAACTGACCCAGTACGCCGGGCTCT  <  NC_002947/834286‑834145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.