| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 970912 = | 44 (0.750) | 5 (0.090) | 4/252 | NT | 10.6% | coding (761/1116 nt) | tgt | queuine tRNA‑ribosyltransferase |
| ? | NC_002947 | 970966 = | 42 (0.740) | coding (815/1116 nt) | tgt | queuine tRNA‑ribosyltransferase | |||||
GGTATAGCAGTCACAGGTCGGATCCAGCGGCGATTCATCGTGACGATGGAACGCATTGCGGATCTTGATCACCCCTGTATCAACGAACAGATGACCGTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGC‑‑CGCG‑GCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/971063‑970912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGAC > NC_002947/970966‑971054 GGTATAGCAGTCACAGGTCGGATCCAGCGGCGATTCATCGTGACGATGGAACGCATTGCGGATCTTGATCACCCCTGTATCAACGAACAGATGACCGTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGC‑‑CGCG‑GC < 5:362085/149‑1 TATAGCAGTCACAGGTCGGATCCAGCGGCGATTCATCGTGACGATGGAACGCATTGCGGATCTTGATCACCCCTGTATCAACGAACAGATGACCGTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGC‑‑CGCG‑GCGC < 5:154124/149‑1 GAACGCATTGCGGATCTTGATCACCCCTGTATCAACGAACAGATGACCGTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGC‑‑CGCG‑GCGCA > 5:293779/1‑104 GAACGCATTGCGGATCTTGATCACCCCTGTATCAACGAACAGATGACCGTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGC‑‑CGCG‑GCGCA < 6:293779/104‑1 GATCACCCCTGTATCAACGAACAGATGACCGTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGC‑‑CGCG‑GCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGAT > 4:265586/1‑148 AACGAACAGATGACCGTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGC‑‑CGCG‑GCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATC < 3:265586/149‑1 CGTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATAAAGGGGTGCTCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGAC > 3:319906/1‑149 GTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGC‑‑CGCG‑GCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATC > 7:75675/1‑134 GTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGC‑‑CGCG‑GCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATC < 8:75675/134‑1 GGTATAGCAGTCACAGGTCGGATCCAGCGGCGATTCATCGTGACGATGGAACGCATTGCGGATCTTGATCACCCCTGTATCAACGAACAGATGACCGTTGCGCGCGTTACGCGTCGGCATCACGCAGTCGAACATGTCGACGC‑‑CGCG‑GCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/971063‑970912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGAC > NC_002947/970966‑971054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |