New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 970912 = | 44 (0.750) | 5 (0.090) | 4/252 | NT | 10.6% | coding (761/1116 nt) | tgt | queuine tRNA‑ribosyltransferase |
? | NC_002947 | 970966 = | 42 (0.740) | coding (815/1116 nt) | tgt | queuine tRNA‑ribosyltransferase |
AGGTGCTGGATTATCTGCCGGACCAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCTATACCTGCACCAACTTCTCGCGCGCCTATCTCCATCATCTGGACAAATGC > NC_002947/970822‑971108 | aGGTGCTGGATTATCTGCCGGACCAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGt > 4:31408/1‑149 (MQ=255) gtcacaggtcggatccagcggcgattcatcgtgacgatggaacgcattgcggatcttgagcacccctttatcaacgaacagatgaccgtTGCGCGCGTTACGCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACg > 3:319906‑M1/90‑149 (MQ=255) tGGATTATCTGCCGGACCAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTg > 7:181570/1‑149 (MQ=255) gatccagcggcgattcatcgtgacgatggaacgcattgcggatcttgatcacccctgtatcaacgaacagatgaccgtTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAAc < 8:75675‑M1/56‑1 (MQ=255) gatccagcggcgattcatcgtgacgatggaacgcattgcggatcttgatcacccctgtatcaacgaacagatgaccgtTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAAc > 7:75675‑M1/79‑134 (MQ=255) gatccagcggcgattcatcgtgacgatggaacgcattgcggatcttgatcacccctgtatcaacgaacagatgaccgtTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGtt < 3:265586‑M1/71‑1 (MQ=255) aTCTGCCGGACCTGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCACACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGtt > 4:82245/1‑149 (MQ=255) ccGGACCAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGa < 7:32663/146‑1 (MQ=255) ccGGACCAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGAt < 6:281252/147‑1 (MQ=255) aCCAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAggg < 8:181570/149‑1 (MQ=255) aCCAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAggg < 2:176592/149‑1 (MQ=255) aCCAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAggg < 4:248069/149‑1 (MQ=255) ccAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAgggg < 1:95135/149‑1 (MQ=255) cAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGt < 3:31408/149‑1 (MQ=255) cAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGt > 1:338805/1‑149 (MQ=255) gATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGa > 1:163219/1‑149 (MQ=255) aTGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGAt < 2:363357/149‑1 (MQ=255) atcgtgacgatggaacgcattgcggatcttgatcacccctgtatcaacgaacagatgaccgtTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATc > 4:265586‑M1/63‑148 (MQ=255) tgctgACAAACCTCGTTACCTTTTGGGGGTAGGAAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTAGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAg > 7:56755/1‑148 (MQ=255) tgctgACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATc > 6:321470/1‑145 (MQ=255) tgACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCAGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATcc > 2:238682/1‑149 (MQ=255) aaaCCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGTG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCaa > 3:170005/1‑149 (MQ=255) aaaCCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCaa > 4:168559/1‑149 (MQ=255) aaaCCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCaa > 4:273430/1‑149 (MQ=255) aaCCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAAt < 4:346973/149‑1 (MQ=255) gTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGtt < 5:96772/148‑1 (MQ=255) gTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGtt < 1:238682/148‑1 (MQ=255) ttACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTcc < 6:330083/149‑1 (MQ=255) aTGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGt < 7:20947/147‑1 (MQ=255) tGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCAc < 2:163219/149‑1 (MQ=255) gtggTATGCAAACGGGAAGATGTCGTTGAGGGTGTGCGC‑CGCG‑‑GGGTCGTCATGTTCGACTGCGTGATGCCGACGCGTAACGCTGGCAACGGTCATCTGTTCGTTGATTCAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACg < 3:79351/146‑1 (MQ=255) gatcacccctgtatcaacgaacagatgaccgttgcgcgcgttacgcgtcggcatcacgcagtcgaacatgtcgacgccgcggcgcaACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGAt > 4:265586‑M2/87‑148 (MQ=255) ggCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGTG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAAt < 4:170005/148‑1 (MQ=255) ggCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAAt < 8:135430/148‑1 (MQ=255) aCCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATcgccgc < 8:56755/149‑1 (MQ=255) gATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGAGTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATcc < 5:321470/149‑1 (MQ=255) gATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATcc > 1:338326/1‑149 (MQ=255) gATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATcc > 1:343707/1‑149 (MQ=255) aacgaacagatgaccgttgcgcgcgttacgcgtcggcatcacgcagtcgaacatgtcgacgccgcggcgcaACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATc < 3:265586‑M2/78‑1 (MQ=255) ttGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCtgt < 2:338326/149‑1 (MQ=255) ttGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCtgt < 2:343707/149‑1 (MQ=255) gggTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGAc > 4:263157/1‑148 (MQ=255) gggTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGAc < 3:263157/148‑1 (MQ=255) gtgtGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAAGGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCAGGATGAATCGCCGCTGGATCCGACCTGTGACTGc > 3:252812/1‑149 (MQ=255) cgttgcgcgcgttacgcgtcggcatcacgcagtcgaacatgtcgacgcgtaacgcgcgcaACGGTCATCTGTTCGTTGATAAAGGGGTGCTCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGAc > 3:319906‑M2/61‑149 (MQ=255) TGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTc < 6:293779‑M1/104‑1 (MQ=255) TGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTc > 5:293779‑M1/1‑104 (MQ=255) gttgcgcgcgttacgcgtcggcatcacgcagtcgaacatgtcgacgccgcggcgcaACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATc > 7:75675‑M2/57‑134 (MQ=255) gttgcgcgcgttacgcgtcggcatcacgcagtcgaacatgtcgacgccgcggcgcaACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATc < 8:75675‑M2/78‑1 (MQ=255) GCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCtata < 5:154124‑M1/149‑1 (MQ=255) GC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCTATAcc < 5:362085‑M1/149‑1 (MQ=255) tCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCTATACCTGCACCAAc < 3:82245/149‑1 (MQ=255) gACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCTATACCTGCACCAACtt > 6:244926/1‑149 (MQ=255) cTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATTCGACCTGTGACTGCTATACCTGCACCAACTTCTCGCGCGcc > 8:275819/1‑148 (MQ=255) gACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCTATACCTGCACCAACTTCTCGCGCGCCTATCTCCatcatc < 5:244926/149‑1 (MQ=255) gTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCTATACCTGCACCAACTTCTCGCGCGCCTAtct > 7:299325/1‑136 (MQ=255) gTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCTATACCTGCACCAACTTCTCGCGCGCCTAtct < 8:299325/136‑1 (MQ=255) cgcgcgCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCTATACCTGCACCAACTTCTCGCGCGCCTATCTCCATCATCTGGACAAAt < 3:168559/149‑1 (MQ=255) cgcgcAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCTATACCTGCACCAACTTCTCGCGCGCCTATCTCCATCATCTGGACAAATgc < 6:362085/149‑1 (MQ=255) | AGGTGCTGGATTATCTGCCGGACCAGATGCCTGCTGACAAACCTCGTTACCTTATGGGGGTAGGCAAACCGGAAGATCTCGTTGAGGGTGTGCGC‑CGCG‑‑GCGTCGACATGTTCGACTGCGTGATGCCGACGCGTAACGCGCGCAACGGTCATCTGTTCGTTGATACAGGGGTGATCAAGATCCGCAATGCGTTCCATCGTCACGATGAATCGCCGCTGGATCCGACCTGTGACTGCTATACCTGCACCAACTTCTCGCGCGCCTATCTCCATCATCTGGACAAATGC > NC_002947/970822‑971108 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |