| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1054325 = | 47 (0.800) | 3 (0.050) | 3/246 | NT | 6.6% | coding (139/588 nt) | PP_0912 | hypothetical protein |
| ? | NC_002947 | 1054389 = | 41 (0.740) | coding (75/588 nt) | PP_0912 | hypothetical protein | |||||
CGCAAACGCCCGGCCTTGTGCCGGGCGTTTTCGTTTGCTGCCGGGTAAAACGCTTCCCGCTGCCTGGCGTGCACGCAGATGCTCATCCTGTAGGCCTTCGATCAAACCTAACAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGGGCGAAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1054480‑1054325‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaggccTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGT > NC_002947/1054389‑1054534 CGCAAACGCCCGGCCTTGTGCCGGGCGTTTTCGTTTGCTGCCGGGTAAAACGCTTCCCGCTGCCTGGCGTGCACGCAGATGCTCATCCTGTAGGCCTTCGATCAAACCTAACAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGGGC > 2:170629/1‑149 AACGCCCGGCCTTGTGCCGGGCGTTTTCGTTTGCTGCCGGGTAAAACGCTTCCCGCTGCCTGGCGTGCACGCAGATGCTCATCCTGTAGGCCTTCGATCAAACCTAACAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGGGCGAAG < 4:147114/149‑1 ACGCCCGGCCTTGTGCCGGGCGTTTTCGTTTGCTGCCGGGTAAAACGCTTCCCGCTGCCTGGCGTGCACGCAGATGCTCATCCTGTAGGCCTTCGATCAAACCTAACAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGGGCGAAGG < 6:300907/149‑1 ACGCCCGGCATTGTGCCGGGCGTTTTCGTTTGCTGCCGGGTAAAACGCTTCCAGCTGCCTGTCGTGAACGCAGATGCTCATCATGTAGGCCTTCGATCAAACCTAAAAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGGGCGAAGG > 2:332633/1‑149 GCCCGGCCTTGTGCCGGGCGTTTTCGTTTGCTGCCGGGTAAAACGCTTCCCGCTGCCTGGCGTGCACGCAGATGCTCATCCTGTAGGCCTTCGATCAAACCTAACAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGGGCGAAG > 5:263518/1‑146 GCCCGGCCTTGTGCCGGGCGTTTTCGTTTGCTGCCGGGTAAAACGCTTCCCGCTGCCTGGCGTGCACGCAGATGCTCATCCTGTAGGCCTTCGATCAAACCTAACAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGGGCGAAG < 6:263518/146‑1 TGTAGGCCTTCGATCAAACCTAACAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGGGCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCA < 5:91721/122‑1 TGTAGGCCTTCGATCAAACCTAACAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGGGCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCA > 6:91721/1‑122 GCCTTCGATCAAACCTAACAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGCGCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGCCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCG > 8:141990/1‑149 atctAAGGCCTACAGTAGGAGCATCTGCGTGCACGCCAGGCAGCGGTAAGCGTTTTACCCGGCAGCAAACTAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGG < 6:62172/144‑1 GCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGT < 3:147114/149‑1 CGCAAACGCCCGGCCTTGTGCCGGGCGTTTTCGTTTGCTGCCGGGTAAAACGCTTCCCGCTGCCTGGCGTGCACGCAGATGCTCATCCTGTAGGCCTTCGATCAAACCTAACAGGAGGCACAGTGCTGCAGATTCTTGATGTCTGGGGCGAAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1054480‑1054325‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaggccTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGT > NC_002947/1054389‑1054534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |