| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1054325 = | 47 (0.800) | 3 (0.050) | 3/246 | NT | 6.6% | coding (139/588 nt) | PP_0912 | hypothetical protein |
| ? | NC_002947 | 1054389 = | 41 (0.740) | coding (75/588 nt) | PP_0912 | hypothetical protein | |||||
TGAGCTGGCCAGCCTTGTTCAGGTTGTACGCATCGTTGAATCCGGTGATGAGGTCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGG > NC_002947/1054244‑1054537 | tGAGCTGGCCAGCCTTGTTCAGGTTGTACGCATCGTTGAATCCGGTGATGAGGTCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACa < 8:92393/149‑1 (MQ=255) cAGCCTTGTTCAGGTTGTACGCATCGTTGAATCCGGTGATGAGGTCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCa > 7:69026/1‑149 (MQ=255) cAGCCTTGTTCAGGTTGTACGCATAGTTAAATCCGGTGATGAGGTCTTCCCCATTCATGCGCTGGACGATTCGGCCTTAGCCCCAGACATCAAGAATATGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCa > 1:23264/1‑149 (MQ=255) gTTCAGGTTGTACGCATCGTTGAATCCGGTGATGAGGTCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGt > 4:112612/1‑149 (MQ=255) cAGGTTGTACGCATCGTTGAATCCGGTGATGAGGTCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCa > 6:123563/1‑149 (MQ=255) gTTGTACGCATCGTTGAATCCGGTGATGAGGTCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGc < 8:324568/149‑1 (MQ=255) tgccgggtaaaacgcttcccgctgcctggcgtgcacgcagatgctcatcctgtaGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACa > 6:91721‑M1/55‑122 (MQ=255) tgccgggtaaaacgcttcccgctgcctggcgtgcacgcagatgctcatcctgtaGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACa < 5:91721‑M1/68‑1 (MQ=255) gTTGAATGCGGGCAAGAGGTCTTCCCCATTCATGGGCGGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTTCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGa < 8:83732/149‑1 (MQ=255) tcaggTGATGAGGTCTTACCCATTCATGCGATGGACGATTCGGCCTTCTCCCCAGACATCAAGAATCTGCATCACTGTGCCTCATGTTAGGTTTGATCGAAGGCCTACAGTATGATCATCTGCGTGCACGCAAGGCAGCGGGAAGCGtt > 1:332633/4‑149 (MQ=255) ccGGTGATGAGGTCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGttt > 4:96561/1‑149 (MQ=255) cGGTGATGAGGTCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGttt < 5:123563/148‑1 (MQ=255) gTGATGAGGGCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTAc < 6:276925/149‑1 (MQ=255) tCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTa < 6:4935/94‑1 (MQ=255) tCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTa > 5:4935/1‑94 (MQ=255) ttCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCaaa > 8:80843/1‑149 (MQ=255) ccccATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAc > 6:276983/1‑148 (MQ=255) aTTCATGCGCTGGACTATTCGGCATTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTTATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGaaaa < 3:298347/149‑1 (MQ=255) cgcTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCg < 7:80843/148‑1 (MQ=255) ggACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGcac > 1:170629/1‑148 (MQ=255) gACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACaa < 5:26037/149‑1 (MQ=255) aCGATTCGGCCTTCGCCCCAGACATCAAGAATCTTCAGCACTGTGCCTCCTGTTATGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAATCGTTTTACCCGTCAGCAAACGAAAACGCCCGGCACaa < 2:23264/148‑1 (MQ=255) tgtaggccttcgatcaaacctaacaggaggcacagtgctgcagattcttgatgtctggggcgaaggccTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGgca < 5:91721‑M2/54‑1 (MQ=255) tgtaggccttcgatcaaacctaacaggaggcacagtgctgcagattcttgatgtctggggcgaaggccTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGgca > 6:91721‑M2/69‑122 (MQ=255) ttCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCg < 3:112612/149‑1 (MQ=255) cGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCggg > 1:174325/1‑149 (MQ=255) gccttcgatcaaacctaacaggaggcacagtgctgcagattcttgatgtctggcgcgaaggccTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGCCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCg > 8:141990‑M2/64‑149 (MQ=255) CCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTTTTAGGTTTGATCGAAGGCCTACATGATGAGCATCTGCGTTCACGACAGGCAGCTGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAATGCCGGGCGt > 2:332633‑M1/1‑149 (MQ=255) CCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGt < 6:300907‑M1/149‑1 (MQ=255) CTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGc > 5:263518‑M1/1‑146 (MQ=255) CTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGc < 6:263518‑M1/146‑1 (MQ=255) CTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGtt < 4:147114‑M1/149‑1 (MQ=255) GCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCg > 2:170629‑M1/1‑149 (MQ=255) ccAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGt > 5:62172/1‑148 (MQ=255) ccAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGt > 7:176660/1‑148 (MQ=255) aGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGAAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTg > 5:9911/1‑147 (MQ=255) gACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAg < 5:232986/149‑1 (MQ=255) aTCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGt > 3:10044/1‑142 (MQ=255) aTCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAgcgc < 5:300907/149‑1 (MQ=255) aTCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAgcgc > 5:216573/1‑149 (MQ=255) aTCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCATACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGt < 4:10044/142‑1 (MQ=255) cAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTa > 4:258359/1‑149 (MQ=255) aaGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGc > 6:274158/1‑130 (MQ=255) aaGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGc < 5:274158/130‑1 (MQ=255) aaGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTa > 8:171797/1‑148 (MQ=255) acaaTCTGCAGCAATGTGCCTCCTGTTAGGTTTGATCGAAGCCCTACAGGATGACCATCTGCCTGCACGCCAGGCAGCGGGAAGCGTTTTACCAGGCAGCAAACGAAAACGCCAGGCACAAGCCCGGGCGTTAGCGGAGAAGCGCTaaa > 4:97420/3‑147 (MQ=255) aaTCTGCAGCCCTGTGCCTCCTGTTACGTTTCATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCACACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTAcagc < 4:117998/149‑1 (MQ=255) aTCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTAcagca < 8:69026/149‑1 (MQ=255) tCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTAcagcag > 2:350897/1‑149 (MQ=255) tgtgCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGAACAGAACt > 3:87013/1‑149 (MQ=255) cctcctGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTg < 8:176660/149‑1 (MQ=255) gTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCg > 1:317255/1‑148 (MQ=255) ttAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCa < 7:171797/149‑1 (MQ=255) tttGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTc > 2:281523/1‑149 (MQ=255) tttGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGAGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTc > 3:303269/1‑149 (MQ=255) gATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCgg > 1:80148/1‑149 (MQ=255) atctaaggccTACAGTAGGAGCATCTGCGTGCACGCCAGGCAGCGGTAAGCGTTTTACCCGGCAGCAAACTAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCgg < 6:62172‑M2/138‑1 (MQ=255) aTCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCggg > 8:214358/1‑149 (MQ=255) gccTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGt < 3:147114‑M2/146‑1 (MQ=255) tACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTgg > 1:154477/1‑149 (MQ=255) | TGAGCTGGCCAGCCTTGTTCAGGTTGTACGCATCGTTGAATCCGGTGATGAGGTCTTCCCCATTCATGCGCTGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGG > NC_002947/1054244‑1054537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |