New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1156415 = | 39 (0.660) | 3 (0.050) | 3/248 | NT | 6.9% | intergenic (+118/‑98) | PP_1013/yihS | sensor histidine kinase/aldose‑ketose isomerase |
? | NC_002947 | 1156456 = | 44 (0.790) | intergenic (+159/‑57) | PP_1013/yihS | sensor histidine kinase/aldose‑ketose isomerase |
GCGGTGTGGGCCGGGGCATTGAGCCAACTGTTCACATACAGGTTGAGGGGGGTCATGGGCCAGCTTGATCCTTGCCAGTCGTTTGCGAATTCTAGCCAGCGGGGTCATGGCGGATGTCACGAAGGACGACGGGATTGTCACCGGGCAGTGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1156568‑1156415 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacatCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACAGTTGGCTCAATGCCCCGGCCCACACCGCCTGGCGCCTGGCTGAAGCACAGCGCCTGCT > NC_002947/1156456‑1156598 GCGGTGTGGGCCGGGGCATTGAGCCAACTGTTCACATACAGGTTGAGGGGGGTCATGGGCCAGCTTGATCCTTGCCAGTCGTTTGCGAATTCTAGCCAGCGGGGTCATGGCGGATGTCACGAAGGACGACGGGATTGTCACCGGGCAGT < 6:82703/149‑1 GTGGGCCGGGGCATTGAGCCAACTGTTCACATACAGGTTGAGGGGGGTCATGGGCCAGCTTGATCCTTGCCAGTCGTTTGCGAATTCTAGCCAGCGGGGTCATGGCGGATGTCACGAAGGACGACGGGATTGTCACCGGGCAGTGACAT > 4:292852/1‑149 GGATGTCACGAAGAACGACGGGATTGTCACCGGGCAGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACAGTTGGCTCAATGCCCCGGCC < 7:187841/148‑1 GGATGTCACGAAGAACGACGGGATTGTCACCGGGCAGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACAGTTGGCTCAATGCCCCGGCC > 8:187841/1‑148 CACGAAGGACGACGGGATTGTCACCGGGCAGTGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACAGTTGGCTCAATGCCCCGGCCCACACCG > 8:194726/1‑149 TGACATCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACAGTTGGCTCAATGCCCCGGCCCACACCGCCTGGCGCCTGGCTGAAGCACAGCGCCTGCT < 2:257978/149‑1 GCGGTGTGGGCCGGGGCATTGAGCCAACTGTTCACATACAGGTTGAGGGGGGTCATGGGCCAGCTTGATCCTTGCCAGTCGTTTGCGAATTCTAGCCAGCGGGGTCATGGCGGATGTCACGAAGGACGACGGGATTGTCACCGGGCAGTGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1156568‑1156415 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacatCCGCCATGACCCCGCTGGCTAGAATTCGCAAACGACTGGCAAGGATCAAGCTGGCCCATGACCCCCCTCAACCTGTATGTGAACAGTTGGCTCAATGCCCCGGCCCACACCGCCTGGCGCCTGGCTGAAGCACAGCGCCTGCT > NC_002947/1156456‑1156598 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |