| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1775341 | 44 (0.750) | 4 (0.070) | 4/244 | NT | 9.3% | coding (521/1077 nt) | PP_1582 | hypothetical protein |
| ? | NC_002947 | = 1775416 | 37 (0.670) | coding (596/1077 nt) | PP_1582 | hypothetical protein | |||||
CGAATTCCGCACCGGCCCAGATCTTGGCTCATCGCCCGGTTACCACGGCGCGATCGTTTCCAGCGTGACGGGCAAGGTCATTCTGGTACCTGGCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1775186‑1775341‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcgcaCCGTAGGGGATCAACAAAATCCGGCCATCTGGCAGCTCTTCGGCACCACTGAAATAGGTGGTCGCCGCACCTCCATGCGCAGGCCCTTGGGTGAAGGTATTCTTCACCACATCGTAGATGCCGATGTACGGACTGGTGCCAGGTACC < NC_002947/1775416‑1775270 CGAATTCCGCACCGGCCCAGATCTTGGCTCATCGCCCGGTTACCACGGCGCGATCGTTTCCAGCGTGACGGGCAAGGTCATTCTGGTACCTGGCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGC > 7:39064/1‑149 AATTCCGCACCGGCCCAGATCTTGGCTCATCGCCCGGTTAACACCGCCCGATCGATTCCAGCGTGACGGGCAAGGTCATTATGGTACCTCGCACCAGTCAGTACATCGGCATCTACGATGTGGTGATGAATACCTTCACCCAACGGCCT > 7:165589/1‑149 GGTCATTCTGGTACCTGGCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCACCGTAGGGGATCAACAAAATCCGGCCATCTGGCAGCTCTTCGGCACCACTGAAATAGGTGGTCGCCG > 3:44255/1‑148 TGGTACCTGGCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCACCGTAGGGGAGGAACAAAATCCGGCGATCTGGCCGCTCTTCGGCACCACTGAAATAGGTGGTCTCCGCCCCTCCAg > 8:240362/1‑148 GCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCACCGTAGGGGATCAACAAAATCCGGCCATCTGGCAGCTCTTCGGCACCACTGAAATAGGTGGTCGCCGCACCTCCATGCGCAGG < 4:44255/147‑1 TACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCACCGTAGGGGATCAACAAAATCCGGCCATCTGGAAGCTCTTCGGCACCACTGAAATAGGTGGTCGCCGCACCTCCATGCGCAGGCCCTTGGGTGAAG < 7:240362/149‑1 CTGCGCACCGTAGGGGATCAACAAAATCAGGCCATCTGGCAGCTCTTCGGCAACACTGAAATAGGTGGTCGCCGCACCTCCATGCGCAGGCCCTTGGGTGAAGGTATTCTTCACCACATCGTAGATGCCGATGTACGGACTGGTGCCAG < 6:43014/149‑1 CACCGTAGGGGATCAACAAAATCCGGCCATCTGGCAGCTCTTCGGCACCACTGAAATAGGTGGTCGCCGCACCTCCATGCGCAGGCCCTTGGGTGAAGGTATTCTTCACCACATCGTAGATGCCGATGTACGGACTGGTGCCAGGTACC < 8:191396/149‑1 CGAATTCCGCACCGGCCCAGATCTTGGCTCATCGCCCGGTTACCACGGCGCGATCGTTTCCAGCGTGACGGGCAAGGTCATTCTGGTACCTGGCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1775186‑1775341‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcgcaCCGTAGGGGATCAACAAAATCCGGCCATCTGGCAGCTCTTCGGCACCACTGAAATAGGTGGTCGCCGCACCTCCATGCGCAGGCCCTTGGGTGAAGGTATTCTTCACCACATCGTAGATGCCGATGTACGGACTGGTGCCAGGTACC < NC_002947/1775416‑1775270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |