New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1775341	44 (0.750)	4 (0.070)	4/244	NT	9.3%	coding (521/1077 nt)	PP_1582	hypothetical protein
	?	NC_002947	= 1775416	37 (0.670)					coding (596/1077 nt)	PP_1582	hypothetical protein

GGTACCTGGCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCAGAACGGTGACGTGGTATGCGCTCCGTACACTGCCGCTACGATTG  >  NC_002947/1775270‑1775559                                                                                                                                                   |                                                                                                                                                ggTACCTGGCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGtg                                                                                                                                               <  8:191396‑M2/149‑3 (MQ=255)      cTGGCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGTTGCCGAAGAGCTGCCAGATGGCCTGATTTTGTTGATCCCCTACGGtgcgcag                                                                                                                                          <  6:43014‑M2/149‑8 (MQ=255)         gCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGAGCATGGAGGTCCGGCGACCACCTATTTCAGTGGTGCCGAAGAGATGCCAGATGGCCGGATTTTTTTGATCCCCTACGGTGCGCAGGCa                                                                                                                                       >  5:173883/1‑149 (MQ=255)                  cGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGCCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCAt                                                                                                                               >  8:332314/1‑148 (MQ=255)                    tACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTa                                                                                                                            >  8:128758/1‑149 (MQ=255)                       aTCGTCATCTACGATGTGGTTAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGa                                                                                                                         <  6:173883/149‑1 (MQ=255)                        tCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGAc                                                                                                                        <  4:367491/149‑1 (MQ=255)                          ggCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGAccc                                                                                                                      >  6:61036/1‑149 (MQ=255)                                 aCGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGa                                                                                                                         >  8:113058/1‑139 (MQ=255)                                 aCGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGa                                                                                                                         <  7:113058/139‑1 (MQ=255)                                  cGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATc                                                                                                                  <  4:293423/145‑1 (MQ=255)                                   gATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCaa                                                                                                             <  5:43014/149‑1 (MQ=255)                                       tggtgAAGAATAGCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAacac                                                                                                          <  3:142074/148‑1 (MQ=255)                                         gtgAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCt                                                                                                        <  5:73657/148‑1 (MQ=255)                                          tgAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTg                                                                                                       >  5:51736/1‑148 (MQ=255)                                                   ccTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTg                                                                                             <  5:8322/149‑1 (MQ=255)                                                    cTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTTCCAGATGGCCGGATTTTGTTGATCCCCTACGGtgcgcaggcccttgggtgaaggtattcttcaccacatcgtagatgccgatgta                                                                                            <  7:240362‑M2/149‑54 (MQ=255)                                                    cTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGGCCCGATCGCCAACACCTGTACCAAAGTgg                                                                                            >  5:330223/1‑149 (MQ=255)                                                           cAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCgg                                                                                     >  1:357908/1‑149 (MQ=255)                                                             aGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCTGTGTTGCCGAAGAGCTTCCAGATGGCCGGATTTTGTTGCTCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCATCACCTGTACCATAGTGGTCACCGTGa                                                                                   <  2:365138/149‑1 (MQ=255)                                                                gCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTa                                                                                >  3:163925/1‑149 (MQ=255)                                                                 ccTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGtgcgcaggcccttgggtgaaggtattcttcaccacatcgtagatgccgatgtacggactggtgc                                                                                 <  4:44255‑M2/147‑65 (MQ=255)                                                                     cgcATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTc                                                                            <  4:163925/148‑1 (MQ=255)                                                                        ctgGAGGGGCGGAGACCACCTATTTCAGTGGTGCCGAAGAGCGGCCAGATCGCCGGATTTTGTTCCTCCCCTACGGtgcgcaggcccttgggtgaaggtattcttcaccacatcgtagatgccgatgtacggactggtgccaggtacca                                                                        >  8:240362‑M2/2‑76 (MQ=255)                                                                           gAGTTGCGGCGACCAGCTATTTCAGTGGTGCCGAATAGCTGCGAGATGGCCGGATTTTGTTGATCCCCTCCGGTGCGCAGGCATTCGTCATCTACGTCCCGATGGCCAAGACCTGTACCAAAGTGGTCACCGGTATTACCTCGGCTGcc                                                                     <  8:165589/149‑1 (MQ=255)                                                                           gAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGc                                                                      <  7:128758/148‑1 (MQ=255)                                                                              gTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCctac                                                                  <  6:51736/149‑1 (MQ=255)                                                                                 cggcgACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGtgcgcaggcccttgggtgaaggtattcttcaccacatcgtagatgccgatgtacggactggtgccaggtaccagaatgacc                                                                >  3:44255‑M2/1‑67 (MQ=255)                                                                                     gACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGt                                                           >  8:37418/1‑149 (MQ=255)                                                                                          ccTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTAc                                                                               >  4:295851/1‑124 (MQ=255)                                                                                          ccTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTAc                                                                               <  3:295851/124‑1 (MQ=255)                                                                                              tttCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGa                                                  <  6:330223/149‑1 (MQ=255)                                                                                                  aGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCa                                              <  7:191396/149‑1 (MQ=255)                                                                                                   gtggtgCCGAAGAGCTGCGAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCAg                                             <  7:332314/149‑1 (MQ=255)                                                                                                          cGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCAGAACGGTg                                      <  6:246571/149‑1 (MQ=255)                                                                                                           gAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTAAGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGca                                                                     >  8:134271/1‑116 (MQ=255)                                                                                                                  tGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCAGAACGGTGACGTGGTa                              >  7:216556/1‑149 (MQ=255)                                                                                                                    ccAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACgg                                                             <  3:252039/116‑1 (MQ=255)                                                                                                                    ccAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACgg                                                             >  4:252039/1‑116 (MQ=255)                                                                                                                            ccGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCAGAACGGTGACGTGGt                               >  3:195370/1‑138 (MQ=255)                                                                                                                            ccGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCAGAACGGTGACGTGGt                               <  4:195370/138‑1 (MQ=255)                                                                                                                            ccGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCAGAACGGTGACGTGGTATGCGCTCCg                     >  1:201005/1‑148 (MQ=255)                                                                                                                              ggATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACCCCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCAGAGCGGGGACGTGGTAGGCGCTCCGTac                  >  8:152872/1‑149 (MQ=255)                                                                                                                                              cTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCAGAACGGTGACGTGGTATGCGCTCCGTACACTGCCGCTACGATTg  >  1:44456/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                GGTACCTGGCACCAGTCCGTACATCGGCATCTACGATGTGGTGAAGAATACCTTCACCCAAGGGCCTGCGCATGGAGGTGCGGCGACCACCTATTTCAGTGGTGCCGAAGAGCTGCCAGATGGCCGGATTTTGTTGATCCCCTACGGTGCGCAGGCATTCGTCATCTACGACCCGATCGCCAACACCTGTACCAAAGTGGTCACCGGGATTACCTCGGCTGCCTACTACGGGTCTGCAAAGATTCAGAACGGTGACGTGGTATGCGCTCCGTACACTGCCGCTACGATTG  >  NC_002947/1775270‑1775559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.