| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2417488 = | 48 (0.820) | 3 (0.050) | 3/248 | NT | 6.2% | coding (523/1764 nt) | PP_2119 | ABC transporter permease/ATP‑binding protein |
| ? | NC_002947 | 2417551 = | 45 (0.810) | coding (586/1764 nt) | PP_2119 | ABC transporter permease/ATP‑binding protein | |||||
GTGCGCCTGGTGGTTGTAGGCCTGCACGGTCTTGATCTGCCCCAGCGTCTCAGCCACGTAGCTGCCCACATCGGCGACTCTGTCCTGGCTCTGCCGCGACAGGCTGCGCACCCGACGGCCGAACAACAGGATCGGTGCCAACACCAGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2417640‑2417488‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcagAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGACCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGCAAGCGGA > NC_002947/2417551‑2417698 GTGCGCCTGGTGGTTGTAGGCCTGCACGGTCTTGATCTGCCCCAGCGTCTCAGCCACGTAGCTGCCCACATCGGCGACTCTGTCCTGGCTCTGCCGCGACAGGCTGCGCACCCGACGGCCGAACAACAGGATCGGTGCCAACACCAGC < 1:368922/148‑1 GTGGTTGTAGGCCTGCACGGTCTTGATCTGCCCCAGCGTCTCATCCACGTAGCTGCCCACATCGGCGACTCTGTCCTGGCTCTGCCGCGACAGGCTGCGCACCCGACGGCCGAACAACAGGATCGGTGCCAACACCCGCGGCAGAGtta > 2:242335/1‑146 TCTGCCGCGACAGGCTGCGCACCCGACGGCCGAACAACAGGATCGGTGCCAACACCAGCGGCAGAGCCAGGCCAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGG > 5:97821/1‑149 GCCGCGACAGGCTGCGCACCCGACGGCCGAACAACAGGATCGGTGCCAACACCAGCGGCAGAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAAC < 7:169500/139‑1 GCCGCGACAGGCTGCGCACCCGACGGCCGAACAACAGGATCGGTGCCAACACCAGCGGCAGAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAAC > 8:169500/1‑139 GCGGCAGAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGACCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGC > 1:166936/1‑148 GCGGCAGAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGACCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGC > 1:172378/1‑148 GGCAGAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGAACATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGACCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTAGCCCGCAAG > 5:353001/1‑149 GCAGAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGACCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGCAAGC < 5:347501/149‑1 GCAGAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGACCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGCAAGC > 6:347501/1‑149 GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGACCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGCAAGCGGA < 4:88179/149‑1 GTGCGCCTGGTGGTTGTAGGCCTGCACGGTCTTGATCTGCCCCAGCGTCTCAGCCACGTAGCTGCCCACATCGGCGACTCTGTCCTGGCTCTGCCGCGACAGGCTGCGCACCCGACGGCCGAACAACAGGATCGGTGCCAACACCAGCGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2417640‑2417488‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcagAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGACCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGCAAGCGGA > NC_002947/2417551‑2417698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |