New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2417488 =	48 (0.820)	3 (0.050)	3/248	NT	6.2%	coding (523/1764 nt)	PP_2119	ABC transporter permease/ATP‑binding protein
	?	NC_002947	2417551 =	45 (0.810)					coding (586/1764 nt)	PP_2119	ABC transporter permease/ATP‑binding protein

CCTGCGCAACGCGCTGATGGTCATTGGCGGTGTGGTATTGCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGCAAGCGGA  >  NC_002947/2417403‑2417698                                                                                                                                                       |                                                                                                                                                     cctggtggttgtaggcctgcacggtcttgatctgccccagcgtctcagccacgtagctgcccacatcggcgactctggcctggctCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCa‑‑ga                                                                                                                                                      >  5:97821‑M1/86‑149 (MQ=255)  cTGCGCAACGCGCTGATGGTCATTGGCGGTGTGGTATTGCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCa‑‑gag                                                                                                                                                     >  8:82852/1‑149 (MQ=255)  cTGCGCAACGCGCTGATGGTCATTGGCGGTGTGGTATTGCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCa‑‑gag                                                                                                                                                     >  3:277105/1‑149 (MQ=255)       gtggttgtaggcctgcacggtcttgatctgccccagcgtctcatccacgtagctgcccacatcggcgactctgtcctggctctgccgcgacaggctgcgcacccgacggccgaacaacaggatcggtgccaacacccgcggcagagtta                                                                                                                                                  >  2:242335‑M2/145‑146 (MQ=255)        aaCGCGCTGATGGTCATTGGCGGTGTGGTATTGCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGa                                                                                                                                               >  5:144263/1‑149 (MQ=255)            cgcTGATGGTCATTGGCGGTGTGGTATTGCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTGGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACaga                                                                                                                                           <  3:53929/149‑1 (MQ=255)             gcTGATGGTCATTGGCGGTGTGGTATTGCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGa                                                                                                                                               <  1:284464/144‑1 (MQ=255)             gcTGATGGTCATTGGCGGTGTGGTATTGCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGa                                                                                                                                               >  2:284464/1‑144 (MQ=255)                           gctgtgtGGTATTGCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTggg                                                                                                                             <  3:78992/145‑1 (MQ=255)                                      ttGCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGc                                                                                                                 >  2:110356/1‑149 (MQ=255)                                        gCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCTATGTGGGCCGATACGTgtgt                                                                                                                >  6:259867/1‑145 (MQ=255)                                               atcaCCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGAtgt                                                                                                                                >  4:196257/1‑125 (MQ=255)                                               atcaCCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGAtgt                                                                                                                                <  3:196257/125‑1 (MQ=255)                                                tcaCCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTg                                                                                                       <  6:60471/149‑1 (MQ=255)                                                  aCCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTgg                                                                                                      <  2:103911/148‑1 (MQ=255)                                                       ccccAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGa                                                                                                <  5:259867/149‑1 (MQ=255)                                                        cccAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACa                                                                                                                                             <  3:108869/103‑1 (MQ=255)                                                        cccAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACa                                                                                                                                             >  4:108869/1‑103 (MQ=255)                                                        cccAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTgggg                                                                                                    >  7:162749/1‑144 (MQ=255)                                                        cccAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTgg                                                                                                      >  5:173037/1‑142 (MQ=255)                                                        cccAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTgg                                                                                                      <  6:173037/142‑1 (MQ=255)                                                        cccAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGAAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTgggg                                                                                                    >  6:70031/1‑144 (MQ=255)                                                          cAAGCTCACCAGCAACGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATc                                                                                              >  7:315914/1‑148 (MQ=255)                                                                 aacAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCACCGAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGa                                                                                          <  1:110356/145‑1 (MQ=255)                                                                 aCCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGt                                                                                      >  6:352893/1‑149 (MQ=255)                                                                     gCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAg                                                                                  <  5:170659/149‑1 (MQ=255)                                                                       aTCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGc                                                                                >  5:238777/1‑149 (MQ=255)                                                                           tggtggTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTa                                                                             >  7:223593/1‑148 (MQ=255)                                                                           tggtggTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTa                                                                             >  3:769/1‑148 (MQ=255)                                                                                 taactCTGCCGCGGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGATGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAaccac                                                                      >  2:242335‑M1/6‑149 (MQ=255)                                                                                    cGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAg                                                                   <  8:162749/149‑1 (MQ=255)                                                                                       tctgccgcgacaggctgcgcacccgacggccgaacaacaggatcggtgccaacaccagcggcagAGCCAGGCCAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAgg                                                                  >  5:97821‑M2/65‑149 (MQ=255)                                                                                          gccgcgacaggctgcgcacccgacggccgaacaacaggatcggtgccaacaccagcggcagAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAac                                                                         <  7:169500‑M2/78‑1 (MQ=255)                                                                                          gccgcgacaggctgcgcacccgacggccgaacaacaggatcggtgccaacaccagcggcagAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAac                                                                         >  8:169500‑M2/62‑139 (MQ=255)                                                                                           GCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCAc                                                             <  1:368922‑M1/148‑1 (MQ=255)                                                                                                       aCCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGt                                               >  2:155147/1‑149 (MQ=255)                                                                                                          gATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCg                                            >  5:297132/1‑149 (MQ=255)                                                                                                           aTCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGc                                           <  7:82852/149‑1 (MQ=255)                                                                                                            tCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGcc                                          >  2:22201/1‑149 (MQ=255)                                                                                                               tgttgtTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGa                                        >  8:104877/1‑148 (MQ=255)                                                                                                                gttgttCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATa                                      >  4:279317/1‑149 (MQ=255)                                                                                                                gttgttCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATa                                      >  2:251023/1‑149 (MQ=255)                                                                                                                 ttgttCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATAc                                     >  5:292719/1‑149 (MQ=255)                                                                                                                      cGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACgg                                   >  6:16954/1‑146 (MQ=255)                                                                                                                      cGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACgg                                   <  5:16954/146‑1 (MQ=255)                                                                                                                      cGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTc                                 <  6:144263/148‑1 (MQ=255)                                                                                                                      cGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTc                                 <  2:368922/148‑1 (MQ=255)                                                                                                                      cGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTc                                 >  3:88179/1‑148 (MQ=255)                                                                                                                       ggCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGa                               >  7:48049/1‑149 (MQ=255)                                                                                                                        gCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCg                                >  3:184944/1‑147 (MQ=255)                                                                                                                        gCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGaa                              <  8:223593/149‑1 (MQ=255)                                                                                                                         ccGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGACCCGCGAACTGTTCGCCGATACGGTCGaa                              <  1:22201/149‑1 (MQ=255)                                                                                                                                      aGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGt                <  5:352893/149‑1 (MQ=255)                                                                                                                                       gCCTGGCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGtt               <  4:277105/149‑1 (MQ=255)                                                                                                                                            tCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGccc           <  6:297132/148‑1 (MQ=255)                                                                                                                                                gcggcagAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGc         >  1:166936‑M2/8‑148 (MQ=255)                                                                                                                                                gcggcagAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGc         >  1:172378‑M2/8‑148 (MQ=255)                                                                                                                                                  ggcagAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGAACATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTAGCCCGCAAg      >  5:353001‑M2/6‑149 (MQ=255)                                                                                                                                                   gcagAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGCAAGc     >  6:347501‑M2/5‑149 (MQ=255)                                                                                                                                                   gcagAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGCAAGc     <  5:347501‑M2/145‑1 (MQ=255)                                                                                                                                                      gAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGCAAGCGGa  <  4:88179‑M2/148‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                     CCTGCGCAACGCGCTGATGGTCATTGGCGGTGTGGTATTGCTGTTCATCACCAACCCCAAGCTCACCAGCATCGTGGTGGTAACGCTGCCGCTGGTGTTGGCACCGATCCTGTTGTTCGGCCGTCGGGTGCGCAGCCTGTCGCGGCA‑‑GAGCCAGGACAGAGTCGCCGATGTGGGCAGCTACGTGGCTGAGACGCTGGGGCAGATCAAGACCGTGCAGGCCTACAACCACCAGGCGCACGA‑CCGCGAACTGTTCGCCGATACGGTCGAAGCAGCGTTTACTGTTGCCCGCAAGCGGA  >  NC_002947/2417403‑2417698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.