New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2534228 =	47 (0.800)	3 (0.050)	3/248	NT	7.5%	coding (1555/1680 nt)	mrpD	K(+)/H(+) antiporter subunit D
	?	NC_002947	2534266 =	30 (0.540)					coding (1517/1680 nt)	mrpD	K(+)/H(+) antiporter subunit D

CCGGCTTGGCCTCGCTGATCGCCTTCGGCCGCGTCGGCATCCAGCGTTTCTGGAAGCCCGAAGAGCGCCCGTCACCGGTGCTGCGGCGCTATGAATGCCTGCCCATCGTCATCCTGCTCGGCTTGTGCCTCATCCTCAGCTTCAAGGCCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2534380‑2534228 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgagcAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAGCAACGCCACCAGGCCCCAGCCGG  >  NC_002947/2534266‑2534413                                                                                                                                                                                                                                                                                                               CCGGCTTGGCCTCGCTGATCGCCTTCGGCCGCGTCGGCATCCAGCGTTTCTGGAAGCCCGAAGAGCGCCCGTCACCGGTGCTGCGGCGCTATGAATGCCTGCCCATCGTCATCCTGCTCGGCTTGTGCCTCATCCTCAGCTTCAAGGCC                                                                                                                                                          >  8:230232/1‑149   GGCTTGGCCTCGCTGATCGCCTTCGGCCGCGTCGGCATCCAGCGTTTCTGGAAGCCCGAAGAGCGCCCGTCACCGGTGCTGCGGCGCTATGAATGCCTGCCCATCGTCATCCTGCTCGGCTTGTGCCTCATCCTCAGCTTCAAGGCCGA                                                                                                                                                        <  8:203972/149‑1                                                                                                                   TGCTCGGCTTGTGCCTCATCCTCAGCTTCAAGGCCGAGCAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCC                                          >  5:60159/1‑147                                                                                                                     CTCGGCTTGTGCCTCATCCTCAGCTTCAAGGCCGAGCAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGA                                                     >  1:346137/1‑134                                                                                                                     CTCGGCTTGTGCCTCATCCTCAGCTTCAAGGCCGAGCAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGA                                                     <  2:346137/134‑1                                                                                                                                                   GCCGAGCAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGAT                            <  7:337004/129‑1                                                                                                                                                   GCCGAGCAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGAT                            >  8:337004/1‑129                                                                                                                                                    CCGAGCAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCTATCAGCGAGGCCAAGCCGGACAGGATCAGCAACGCCACCAGGCCCCA       <  6:117870/149‑1                                                                                                                                                         CAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAGCAACGCCACCAGGCCCCAGCCGG  <  4:125596/149‑1                                                                                                                                                                                                                                                                                                               CCGGCTTGGCCTCGCTGATCGCCTTCGGCCGCGTCGGCATCCAGCGTTTCTGGAAGCCCGAAGAGCGCCCGTCACCGGTGCTGCGGCGCTATGAATGCCTGCCCATCGTCATCCTGCTCGGCTTGTGCCTCATCCTCAGCTTCAAGGCCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2534380‑2534228 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgagcAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAGCAACGCCACCAGGCCCCAGCCGG  >  NC_002947/2534266‑2534413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.