New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2607902	48 (0.820)	3 (0.050)	3/244	NT	6.6%	coding (11/414 nt)	PP_5514	hypothetical protein
	?	NC_002947	= 2607924	40 (0.730)					coding (33/414 nt)	PP_5514	hypothetical protein

ATCGTTATTCAGAACGACTCACCGATGCCTTCGGCCTTCCTGAGCGCGGACTGGGAGGGCTTCTTTGTCAAACGCAGCCAGGCTGTCTGAGGCGGCGTGGGTACTTGGGACGACACCGGCACACTGCCATGAGCTGGCCGCCAACATGCGGGAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2607747‑2607902 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggaggaCTTCCAGATTTCGTCCCGGTCCTCCTCCCGCATGTTG  <  NC_002947/2607924‑2607888                                                                                                                                                                                                   ATCGTTATTCAGAACGACTCACCGATGCCTTCGGCCTTCCTGAGCGCGGACTGGGAGGGCTTCTTTGTCAAACGCAGCCAGGCTGTCTGAGGCGGCGTGGGTACTTGGGACGACACCGGCACACTGCCATGAGCTGGCCGCCAACATGC                                              >  3:66126/1‑149  TCGTTATTCAGAACGACTCACCGATGCCTTCGGCCTTCCTGAGCGCGGACTGGGAGGGCTTCTTTGTCAAACGCAGCCAGGCTGTCTGAGGCGGCGTGGGTACTTGGGACGACACCGGCACACTGCCATGAGCTGGCCGCCAACATGCG                                             <  2:243933/149‑1     TTATTCAGAACGACTCACCGATGCCTTCGGCCTTCCTGAGCGAGGACTGGGAGGGCTTCTTTGTCAAACGCAGCCAGGCTGTCTGAGGCGGCGTGGGTACTTGGGACGACACCGGCACACTGCCATGAGCTGGCCGCCAACATGCGGGA                                          <  7:341914/149‑1        TTCAGAACGACTCACCGATGCCTTCGGCCTTCCTGAGCGCGGACTGGGAGGGCTTCTTTGTCAAACGCAGCCAGGCTGTCTGAGGCGGCGTGGGTACTTGGGACGACACCGGCACACTGCCATGAGCTGGCCGCCAACATGCGGGAG                                         >  7:135407/1‑147                                             CGCGGACTGGGAGGGCGTCTTTGTCAAACGCAGCCAGGCTGTCTGAGGCGGCGTGGGTACTTGGGACGACACCGGCACACTGCCATGAGCTGGCCGCCAACATGCGGGAGGACTTCCAGATTTCGTCCCGGTCCTCCTCCCGCATGTTG  <  8:265827/149‑1                                                                TTTGTCAAACGCAGCCAGGCTGTCTGAGGCGGCGTGGGTACTTGGGACGACACCGGCACACTGCCATGAGCTGGCCGCCAACATGCGGGAGGACTTCCAGATTTCGTCCCGGTCCTCCTCCCGC        >  1:263107/1‑124                                                                TTTGTCAAACGCAGCCAGGCTGTCTGAGGCGGCGTGGGTACTTGGGACGACACCGGCACACTGCCATGAGCTGGCCGCCAACATGCGGGAGGACTTCCAGATTTCGTCCCGGTCCTCCTCCCGC        <  2:263107/124‑1                                                                                                                                                                                                   ATCGTTATTCAGAACGACTCACCGATGCCTTCGGCCTTCCTGAGCGCGGACTGGGAGGGCTTCTTTGTCAAACGCAGCCAGGCTGTCTGAGGCGGCGTGGGTACTTGGGACGACACCGGCACACTGCCATGAGCTGGCCGCCAACATGCGGGAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2607747‑2607902 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggaggaCTTCCAGATTTCGTCCCGGTCCTCCTCCCGCATGTTG  <  NC_002947/2607924‑2607888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.