| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2726248 | 39 (0.660) | 3 (0.050) | 3/250 | NT | 7.4% | coding (408/1083 nt) | PP_2387 | hypothetical protein |
| ? | NC_002947 | = 2726273 | 38 (0.680) | coding (383/1083 nt) | PP_2387 | hypothetical protein | |||||
CGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2726136‑2726248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaccGCCTTGGCCAACTCGGCCATGTGGTGGTGCTCAGTGGCCTCAACAGCCTGGCCCACGAAGCCCTGTGTGAAGTCCTCGCAGGTACCAACGACCCGCAGCACGCCAAGGCCTACCAGGCCTTTCTCAACAGTTTTAGCGAAGGCATG < NC_002947/2726273‑2726128 CGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCTCAGT < 5:40065/148‑1 GCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGA < 3:121944/88‑1 GCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGA > 4:121944/1‑88 TTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCTCAGTGGCC < 1:358298/85‑1 TTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCTCAGTGGCC > 2:358298/1‑85 GCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCTCAGTGGCCTCAACAGCCTGGCCCACGAAGCCCTGTGTGAAGTCCTCGCAGGTACCAACGACCCGCAGCACGCCAAGGCCTACCAGGCCTTTCTC > 7:174940/1‑130 GCACCGCCTTGGCCAACTCGGCCATGTGGTGGTGCTCAGTGGCCTCAACAGCCTGGCCCACGAAGCCCTGTGTGAAGTCCTCGCAGGTACCAACGACCCGCAGCACGCCAAGGCCTACCAGGCCTTTCTC < 8:174940/130‑1 CCGCCTTGGCCAACTCGGCCATGTGGTGGTGCTCAGTGGCCTCAACAGCCTGGCCCACGAAGCCCTGTGTGAAGTCCTCGCAGGTACCAACGACCCGCAGCACGCCAAGGCCTACCAGGCCTTTCTCAACAGTTTTAGCGAAGGCATG > 6:41541/1‑148 CGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2726136‑2726248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaccGCCTTGGCCAACTCGGCCATGTGGTGGTGCTCAGTGGCCTCAACAGCCTGGCCCACGAAGCCCTGTGTGAAGTCCTCGCAGGTACCAACGACCCGCAGCACGCCAAGGCCTACCAGGCCTTTCTCAACAGTTTTAGCGAAGGCATG < NC_002947/2726273‑2726128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |