New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2726248	39 (0.660)	3 (0.050)	3/250	NT	7.4%	coding (408/1083 nt)	PP_2387	hypothetical protein
	?	NC_002947	= 2726273	38 (0.680)					coding (383/1083 nt)	PP_2387	hypothetical protein

CATGCCTTCGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGATGCCCAGGGCTGTG  >  NC_002947/2726128‑2726419                                                                                                                                                  |                                                                                                                                                   cATGCCTTCGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCgg                                                                                                                                                  >  6:41541‑M2/1‑146 (MQ=255)          gCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCtggtgg                                                                                                                                         <  1:241288/148‑1 (MQ=255)                aCTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCtggtg                                                                                                                                          <  5:289098/141‑1 (MQ=255)                aCTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCtggtg                                                                                                                                          >  6:289098/1‑141 (MQ=255)                      gagaAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCggtgc                                                                                                                                               >  7:174940‑M2/1‑125 (MQ=255)                      gagaAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCggtgc                                                                                                                                               <  8:174940‑M2/130‑6 (MQ=255)                         aaaGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTCTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTCGGTCAGCAACatcatc                                                                                                                          >  8:131904/1‑148 (MQ=255)                                tGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTg                                                                                                                  <  5:118664/149‑1 (MQ=255)                                      gCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGc                                                                                                            >  8:26177/1‑149 (MQ=255)                                              gTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGcc                                                                                                    <  6:283661/149‑1 (MQ=255)                                              gTGCTGCGGGGCGTTGGGACGTGGGAGGACTTCACACAGGGCGTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGGCAGGAACATCATCAATTCCTGGGTGGCGTTCAGcc                                                                                                    <  7:131904/149‑1 (MQ=255)                                                       gTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCgg                                                                                           >  5:367563/1‑149 (MQ=255)                                                              gTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGc                                                                                     <  7:26177/148‑1 (MQ=255)                                                                  cTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAAca                                                                                                                               <  8:175164/102‑1 (MQ=255)                                                                  cTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAAca                                                                                                                               >  7:175164/1‑102 (MQ=255)                                                                  cTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGc                                                                                >  3:328380/1‑149 (MQ=255)                                                                  cTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGc                                                                                >  7:318014/1‑149 (MQ=255)                                                                    gCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGc                                                                                >  1:156304/1‑147 (MQ=255)                                                                      gAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGa                                                                            >  5:26170/1‑149 (MQ=255)                                                                        ggACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACt                                                                          >  2:331519/1‑149 (MQ=255)                                                                            ttCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGc                                                                      >  3:269291/1‑149 (MQ=255)                                                                             tCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGcc                                                                     >  6:45985/1‑149 (MQ=255)                                                                               acacaGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTTGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGccc                                                                    <  4:328380/148‑1 (MQ=255)                                                                                cacaGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGt                                                                  >  5:26242/1‑149 (MQ=255)                                                                                  caGGGCTTCGTGGGCCAGGCTGGTGAGGCCACTGAGCACCACCACATGGCCGAGGTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGa                                                                <  6:83034/149‑1 (MQ=255)                                                                                        ttCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGACGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATc                                                           >  7:192118/1‑148 (MQ=255)                                                                                           gTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGAc                                                        <  1:331519/148‑1 (MQ=255)                                                                                           gTGGGCCAGGCTGTGGAGGCCACGGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACa                                                       <  6:167586/149‑1 (MQ=255)                                                                                                      tGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGcc                                            >  2:143307/1‑149 (MQ=255)                                                                                                       gTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCa                                           >  2:46516/1‑149 (MQ=255)                                                                                                        ttGAGGCCACTGAGCACCACCACATTGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCATGGGTGGCGTTAATCCCGCAGCCGGCCAGGCTCAGCCAGACTTAGCCCGTGAGCATCGACAGGTGCGAGGCCAc                                          >  5:26061/1‑149 (MQ=255)                                                                                                          gAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGTTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTACAGACCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACtg                                        >  2:317156/1‑149 (MQ=255)                                                                                                           aGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACtgt                                       <  5:45985/149‑1 (MQ=255)                                                                                                           aGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACtgt                                       <  6:367563/149‑1 (MQ=255)                                                                                                           aGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACtgt                                       <  2:351955/149‑1 (MQ=255)                                                                                                            ggCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCggtgctcagtggcctcaacagcctggcccacgaagccctgtgtgaa                                                                                                      >  2:358298‑M2/1‑39 (MQ=255)                                                                                                            ggCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCggtgctcagtggcctcaacagcctggcccacgaagccctgtgtgaa                                                                                                      <  1:358298‑M2/85‑47 (MQ=255)                                                                                                               cACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTgtgtgt                                   >  8:45001/1‑149 (MQ=255)                                                                                                                aCTGAGCACCACCACATGGCCGAGTTGGCCAAGGCggtgctcagtggcctcaacagcctggcccacgaagccctgtgtgaagtcctcgcaggtaccaacgacccgcagcacgccaaggcctaccaggcctttctcaacagttttagcg                                   <  5:40065‑M2/148‑114 (MQ=255)                                                                                                                  tGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTtcg                                >  7:105593/1‑149 (MQ=255)                                                                                                                    aGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGTGGCCACTGTGTGTtcgt                               <  8:318014/148‑1 (MQ=255)                                                                                                                           ccacATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTg                       >  3:273580/1‑149 (MQ=255)                                                                                                                           ccacATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTg                       <  1:46516/149‑1 (MQ=255)                                                                                                                                   ccGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGAt               >  3:265929/1‑149 (MQ=255)                                                                                                                                        ttGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGATGccc           <  6:26242/148‑1 (MQ=255)                                                                                                                                            ccAAGGCGGTGCTGGTGGGTCAGGATCATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGATGcc            <  7:81559/143‑1 (MQ=255)                                                                                                                                            ccAAGGCGGTGCTGGTGGGTCAGGATCATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGATGcc            >  8:81559/1‑143 (MQ=255)                                                                                                                                                ggCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGATGCCCAGGGCtgtg  <  4:269291/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CATGCCTTCGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGTCGGAGCTGGCGCCGATGCCCAGGGCTGTG  >  NC_002947/2726128‑2726419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.