New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2740726	39 (0.660)	3 (0.050)	3/248	NT	7.5%	coding (3105/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2740749	37 (0.660)					coding (3128/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein

TTCAATTGCTGGCGGCGGTCGGTGGGCGTGGGGGAACTGCAAATCAATGCACAGGAAAACCTCCACGTCATGTTCTGCAATTTCAGATCGAGCGGCTTGCCCAACATACCCCCACAGGTCAGCTTCAGAGGTGTGACCAGCCTGTCGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2740574‑2740726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgctgGGCACCTCCAGAAGGTCAAGGTGCAGCAGCGA  <  NC_002947/2740749‑2740718                                                                                                                                                                                           TTCAATTGCTGGCGGCGGTCGGTGGGCGTGGGGGAACTGCAAATCAATGCACAGGAAAACCTCCACGTCATGTTCTGCAATTTCAGATCGAGCGGCTTGCCCAACATACCCCCACAGGTCAGCTTCAGAGGTGTGACCAGCCTGTCGC                                       <  3:208524/148‑1   CAATTGCTGGCGGCGGTCGGTGGGCGTGGGGGAACTGCAAATCAATGCACAGGAAAACCTCCACGTCATGTTCTGCAATTTCAGATCGAGCGGCTTGCCCAACATACCCCCACAGGTCAGCTTCAGAGGTGTGACCAGCCTGTCGCTGC                                    >  4:193429/1‑149                    CGGTGGGCGTGGGGGAACTGCAAATCAATGCACAGGAAAACCTCCACGTCATGTTCTGCAATTTCAGATCGAGCGGCTTGCCCAACATACCCCCACAGGTCAGCTTCAGAGGTGTGACCAGCCTGTCGCT                                      >  1:99683/1‑130                    CGGTGGGCGTGGGGGAACTGCAAATCAATGCACAGGAAAACCTCCACGTCATGTTCTGCAATTTCAGATCGAGCGGCTTGCCCAACATACCCCCACAGGTCAGCTTCAGAGGTGTGACCAGCCTGTCGCT                                      <  2:99683/130‑1                                   AACTGCAAATCAATGCACAGGAAAACCTCCACGTCATGTTCTGCAATTTCAGATCGAGCGGCTTGCCCAACATACCCCCACAGGTCAGCTTCAGAGGTGTGACCAGCCTGTCGCTGCTGGGCACCTCCAGAAGGTCAAGGTGCAGCAGC    <  3:193429/149‑1                                                      GGAAAACCTCCACGTCATGTTCTGCAATTTCAGATCGAGCGGCTTGCCCAACATACCCCCACAGGTCAGCTTCAGAGGTGTGACCAGCCTGTCGCTGCTGGGCACCTCCAGAAGGCCAAGGTGCAGCAGCGA  <  1:13439/132‑1                                                      GGAAAACCTCCACGTCATGTTCTGCAATTTCAGATCGAGCGGCTTGCCCAACATACCCCCACAGGTCAGCTTCAGAGGTGTGACCAGCCTGTCGCTGCTGGGCACCTCCAGAAGGCCAAGGTGCAGCAGCGA  >  2:13439/1‑132                                                                                                                                                                                           TTCAATTGCTGGCGGCGGTCGGTGGGCGTGGGGGAACTGCAAATCAATGCACAGGAAAACCTCCACGTCATGTTCTGCAATTTCAGATCGAGCGGCTTGCCCAACATACCCCCACAGGTCAGCTTCAGAGGTGTGACCAGCCTGTCGCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2740574‑2740726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgctgGGCACCTCCAGAAGGTCAAGGTGCAGCAGCGA  <  NC_002947/2740749‑2740718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.