| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2963491 | 50 (0.850) | 3 (0.050) | 3/252 | NT | 6.4% | coding (441/942 nt) | PP_2593 | ferric siderophore ABC transporter permease |
| ? | NC_002947 | = 2963537 | 40 (0.710) | coding (395/942 nt) | PP_2593 | ferric siderophore ABC transporter permease | |||||
CGTCCAGCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2963340‑2963491‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGCTGCTGTATTCGGCCGTGC < NC_002947/2963537‑2963391 CGTCCAGCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGC < 4:124667/149‑1 GTCCAGCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCT < 3:356444/149‑1 GTCCAGCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCT > 6:226630/1‑149 GAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAA < 1:43480/149‑1 GAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGA > 2:43480/1‑147 AATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAG < 5:226630/149‑1 CTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGCTGCTGTATTCGGCC < 3:33767/147‑1 CTGGTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGCTGCTGTATTCGGCC < 5:140526/147‑1 GTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGCTGCTGTATTCGGCCGTGC < 5:169770/148‑1 CGTCCAGCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2963340‑2963491‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggTCGGCCTGGTGCTGACCATGGTCATGGCCACGTTCACCCAGTTCGTCCAGCTGAAAGTCAGCCCCGGCGAGTTCTCGATGCTGCTGGGCTACACCCAGGCTTCGTTCAACCGGGCATCGCCGCAGTTGCTGCTGTATTCGGCCGTGC < NC_002947/2963537‑2963391 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |