New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2963491	50 (0.850)	3 (0.050)	3/252	NT	6.4%	coding (441/942 nt)	PP_2593	ferric siderophore ABC transporter permease
	?	NC_002947	= 2963537	40 (0.710)					coding (395/942 nt)	PP_2593	ferric siderophore ABC transporter permease

GCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGCCGAGCATCAGTAGCATCGAGAGCAGGAAATTGC  >  NC_002947/2963346‑2963639                                                                                                                                                  |                                                                                                                                                     gCACCGGTACGGCCCCGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACAGCGGCGATGCCCGGTTCAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGAc                                                                                                                                                    >  2:119461/1‑148 (MQ=255)    ccGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAAc                                                                                                                                                <  2:149980/149‑1 (MQ=255)    ccGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACAAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAAc                                                                                                                                                <  8:145029/149‑1 (MQ=255)       gTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTgg                                                                                                                                             >  2:313694/1‑149 (MQ=255)           ggCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGCCTTTCAGCTGGACGAACTGGGTg                                                                                                                                          >  8:107621/1‑148 (MQ=255)           ggCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTg                                                                                                                                          >  3:156774/1‑148 (MQ=255)                gggCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTg                                                                                                                                    <  3:175021/149‑1 (MQ=255)                gggCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTg                                                                                                                                    <  7:138487/149‑1 (MQ=255)                 ggCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTgg                                                                                                                                   <  7:137356/149‑1 (MQ=255)                     agcagcACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCAt                                                                                                                               >  3:364697/1‑149 (MQ=255)                      gcagcaCACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCGGAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATg                                                                                                                              <  1:109956/149‑1 (MQ=255)                         gcaCACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGAc                                                                                                                            >  6:322614/1‑148 (MQ=255)                           acacacacGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCAt                                                                                                                         <  3:105532/149‑1 (MQ=255)                            cacacacGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATg                                                                                                                        <  4:364697/149‑1 (MQ=255)                               acacGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGt                                                                                                                      >  5:124442/1‑148 (MQ=255)                                    cccgccACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCAc                                                                                                                <  6:277774/149‑1 (MQ=255)                                        ccaccaGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAgg                                                                                                            >  4:281061/1‑149 (MQ=255)                                           ccaGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATg                                                                                                                        <  4:129810/134‑1 (MQ=255)                                           ccaGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATg                                                                                                                        >  3:129810/1‑134 (MQ=255)                                              gCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGAc                                                                                                       <  5:169770‑M2/148‑2 (MQ=255)                                                  ggCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGAccag                                                                                                    <  3:33767‑M2/147‑5 (MQ=255)                                                  ggCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGAccag                                                                                                    <  5:140526‑M2/147‑5 (MQ=255)                                                    ccGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACcagcagc                                                                                                <  6:124442/149‑1 (MQ=255)                                                      gAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGtcggcctggtgctgaccatggtcatggccacgttcacccagttcgtccagctgaaa                                                                                              <  1:43480‑M1/149‑57 (MQ=255)                                                      gAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGtcggcctggtgctgaccatggtcatggccacgttcacccagttcgtccagctga                                                                                                >  2:43480‑M1/1‑93 (MQ=255)                                                       aaTACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGtcggcctggtgctgaccatggtcatggccacgttcacccagttcgtccagctgaaag                                                                                             <  5:226630‑M1/149‑58 (MQ=255)                                                         tACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGaa                                                                                           <  2:65577/149‑1 (MQ=255)                                                         tACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGaa                                                                                           <  2:363120/149‑1 (MQ=255)                                                            agcagcAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTa                                                                                        >  8:50652/1‑149 (MQ=255)                                                             gcctcaACTGCGGCGAGGCCCGGTTGAACGAAGCCTGGGGGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAAGGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTac                                                                                       <  7:113618/145‑1 (MQ=255)                                                              cagcaACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGt                                                                                                                                           <  3:229270/96‑1 (MQ=255)                                                              cagcaACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGt                                                                                                                                           >  4:229270/1‑96 (MQ=255)                                                                gcaACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACg                                                                                    <  6:52632/149‑1 (MQ=255)                                                                 caACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGAACATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACgt                                                                                   >  3:34578/1‑149 (MQ=255)                                                                        ggcgATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGttttt                                                                            <  6:140526/149‑1 (MQ=255)                                                                         gcgATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTg                                                                           <  7:50652/149‑1 (MQ=255)                                                                          cgATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGc                                                                          <  7:107621/149‑1 (MQ=255)                                                                           gATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGcc                                                                         <  3:57034/149‑1 (MQ=255)                                                                           gATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGcc                                                                         <  1:313694/149‑1 (MQ=255)                                                                           gATGCCCGGTGGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGcc                                                                         <  1:227423/149‑1 (MQ=255)                                                                                                    tgtAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAgg                                                <  4:156774/149‑1 (MQ=255)                                                                                                        gCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGccc                                            <  6:169770/149‑1 (MQ=255)                                                                                                        gCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGcc                                             <  4:34578/148‑1 (MQ=255)                                                                                                             gcagcaTCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAg                                       <  3:214752/149‑1 (MQ=255)                                                                                                                 caTCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGc                                   <  8:40787/149‑1 (MQ=255)                                                                                                                 caTCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGc                                   >  7:40787/1‑149 (MQ=255)                                                                                                                   tCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGcc                                  >  2:154000/1‑148 (MQ=255)                                                                                                                   tCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGcc                                  >  7:215876/1‑148 (MQ=255)                                                                                                                      agaACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGCCGAGc                              <  5:322614/149‑1 (MQ=255)                                                                                                                         aCTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGCCGAGCATc                           <  1:154000/149‑1 (MQ=255)                                                                                                                           tCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAGACAGCCAGCGGTGCAGGGCCCAGGAGTAGCCGAGCATCAg                         >  3:107735/1‑149 (MQ=255)                                                                                                                           tCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGCCGAGCATCAg                         >  4:269282/1‑149 (MQ=255)                                                                                                                             gCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGCCGAGCATCAg                         <  3:281061/147‑1 (MQ=255)                                                                                                                              ccGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGttttt                                                                            >  4:105195/1‑95 (MQ=255)                                                                                                                              ccGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGttttt                                                                            <  3:105195/95‑1 (MQ=255)                                                                                                                                    cTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGATACAGCCAGCGGTGCAGGGCCCAGGAGTAGCCGAGCATCAGTAGCATCga                <  4:107735/149‑1 (MQ=255)                                                                                                                                        cTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGAccagctgaaagtcagccccggcgagttctcgatgctgctgggctacacccaggcttcgttcaaccgggcatcgccgcagttgctgctgtatt            <  5:226630‑M2/149‑93 (MQ=255)                                                                                                                                         tttCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGAccagctgaaagtcagccccggcgagttctcgatgctgctgggctacacccaggcttcgttcaaccgggcatcgccgcagttgctgctgtattc           <  1:43480‑M2/149‑94 (MQ=255)                                                                                                                                           tCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGAccagctgaaagtcagccccggcgagttctcgatgctgctgggctacacccaggcttcgttcaaccgggcatcgccgcagttgctgctgtattc           >  2:43480‑M2/1‑54 (MQ=255)                                                                                                                                            cAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGCCGAGCATCAGTAGCATCGAGAGCAgg         <  4:33767/148‑1 (MQ=255)                                                                                                                                              gCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGCCCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAAAAGCCAGCGGTGCATGGCGCAGGAGTAGCCGAGCCTCAGTAGCTTAGAGAGCAGGaaa      >  6:202701/1‑149 (MQ=255)                                                                                                                                               cTGGtcggcctggtgctgaccatggtcatggccacgttcacccagttcgtccagctgaaagtcagccccggcgagttctcgatgctgctgggctacacccaggcttcgttcaaccgggcatcgccgcagttgctgctgtattcggcc       <  5:140526‑M1/147‑144 (MQ=255)                                                                                                                                               cTGGtcggcctggtgctgaccatggtcatggccacgttcacccagttcgtccagctgaaagtcagccccggcgagttctcgatgctgctgggctacacccaggcttcgttcaaccgggcatcgccgcagttgctgctgtattcggcc       <  3:33767‑M1/147‑144 (MQ=255)                                                                                                                                                  gtcggcctggtgctgaccatggtcatggccacgttcacccagttcgtccagctgaaagtcagccccggcgagttctcgatgctgctgggctacacccaggcttcgttcaaccgggcatcgccgcagttgctgctgtattcggccgtgc   <  5:169770‑M1/148‑148 (MQ=255)                                                                                                                                                  gACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACCGCCAGCGGTGCAGGGCCCAGGAGTAGCCGAGCATCAGTAGCATCGAGAGCAGGAAATTGc  >  2:41224/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GCACCGGTACGGCCCGGGCCAGCAGCACACACACGCCCGCCACCAGCACGGCCGAATACAGCAGCAACTGCGGCGATGCCCGGTTGAACGAAGCCTGGGTGTAGCCCAGCAGCATCGAGAACTCGCCGGGGCTGACTTTCAGCTGGACGAACTGGGTGAACGTGGCCATGACCATGGTCAGCACCAGGCCGACCAGCAGCAGGAAGTACACGTTGTTTTTGCCGTCACGAAACAGCCAGCGGTGCAGGGCCCAGGAGTAGCCGAGCATCAGTAGCATCGAGAGCAGGAAATTGC  >  NC_002947/2963346‑2963639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.