New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2987261	28 (0.480)	4 (0.070)	3/254	NT	9.9%	coding (1138/2991 nt)	PP_2612	membrane protein
	?	NC_002947	4109346 =	46 (0.810)					coding (1168/2991 nt)	PP_3616	membrane protein

TGCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAGCCAGGCTGTAGGGGTTATCAATGTGTTGGGGTTCGGCCGTCGCCAGCCAGGCGTCATGATCGTTGCTGGCTTGCAAGGCCAGGTTGCGCAGGGCGGCAATCCGTCGTTCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2987111‑2987261 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcAACCTGGCCTTGCAAGCCAGCAACGATCATGACGTCTGGCTGGCGACGGCCGAATCCCAACACATTGATAACCCCTACAGCCTGGCTGCGGCACTGGCCTGTTACGACCGCGA  >  NC_002947/4109346‑4109458                                                                                                                                                                                                                                                                          TGCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAGCCAGGCTGTAGGGGTTATCAATGTGTAGGGGTTCGGCCGTCGCCAGCCAGGCGTCATGATCGTTGCTGGCTTGCAAGGCCAGGTTGCGCAGGGCGGCAATCCGTCGTTCCAGC                                                                                                                     >  8:288528/1‑149  GCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAGCCAGGCTGTAGGGGTTATCAATGTGTTGGGGTTCGGCCGTCGCCAGCCAGGCGTCATGATCGTTGCTGGCTTGCAAGGCCAGGTTGCGCAGGGCGGCAATCCGTCGTTCCAGCG                                                                                                                    >  8:12764/1‑149  GCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAGCCAGGCTGTAGGGGTTATCAATGTGTTGGGGTTCGGCCGTCGCCAGCCAGGCGTCATGATCGTTGCTGGCTTGCAAGGCCAGGTTGCGCAGGGCGGCAATCCGTCGTTCCAGC                                                                                                                     >  5:317872/1‑148  GCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAGCCAGGCTGTAGGGGTTATCAATGTGTTGGGGTTCGGCCGTCGCCAGCCAGGCGTCATGATCGTTGCTGGCTTGCAAGGCCAGGTTGCGCAGGGCGGCAATCCGTCGTTCCAGC                                                                                                                     <  6:317872/148‑1                                                                                              GATCGTTGCTGGCTTGCAAGGCCAGGTTGCGCAGGGCGGCAATCCGTCGTTCCAGC                                                                                                                     >  7:46201/1‑56                                                                                              GATCGTTGCTGGCTTGCAAGGCCAGGTTGCGCAGGGCGGCAATCCGTCGTTCCAGC                                                                                                                     <  8:46201/56‑1                                                                                                                    CAGGTTGCGCAGGGCGGCAATCCGTCGTTCCAGCGCAACCTGGCCTTGCAAGCCAGCAACGATCATGACGTCTGGCTGGCGACGGCCGAATCCCAACACATTGATAACCCCTACAGCCTGGCTGCGGCACTGGCCTGTTACGACCGCGA  >  7:245721/1‑149                                                                                                                    CAGGTTGCGCAGGGCGGCAATCCGTCGTTCCAGCGCAACCTGGCCTTGCAAGCCAGCAACGATCATGACGTCTGGCTGGCGACGGCCGAATCCCAACACATTGATAACCCCTACAGCCTGGCTGCGGCACTGGCCTGTTACGACCGCGA  >  7:250860/1‑149                                                                                                                      GGTTGCGCAGGGCGGCAATCCGTCGTTCCAGCGCAACCTGGCCTTGCAAGCCAGCAACGATCATGACGCCTGGCTGGCGACGGCCGAACCCCAA                                                       <  1:280411/94‑1                                                                                                                      GGTTGCGCAGGGCGGCAATCCGTCGTTCCAGCGCAACCTGGCCTTGCAAGCCAGCAACGATCATGACGCCTGGCTGGCGACGGCCGAACCCCAA                                                       >  2:280411/1‑94                                                                                                                                                                                                                                                                          TGCGTTCGTCGCGGTCGTAACAGGCCAGTGCCGCAGCCAGGCTGTAGGGGTTATCAATGTGTTGGGGTTCGGCCGTCGCCAGCCAGGCGTCATGATCGTTGCTGGCTTGCAAGGCCAGGTTGCGCAGGGCGGCAATCCGTCGTTCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2987111‑2987261 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcAACCTGGCCTTGCAAGCCAGCAACGATCATGACGTCTGGCTGGCGACGGCCGAATCCCAACACATTGATAACCCCTACAGCCTGGCTGCGGCACTGGCCTGTTACGACCGCGA  >  NC_002947/4109346‑4109458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.