| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3239089 | 44 (0.750) | 3 (0.060) | 3/240 | NT | 7.5% | coding (220/1311 nt) | PP_2837 | uronate transporter |
| ? | NC_002947 | = 3239129 | 34 (0.630) | coding (260/1311 nt) | PP_2837 | uronate transporter | |||||
TCAACTACCTGGACCGTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3238931‑3239089‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcctgggcaACCGACCAGCCCAGCAACGACGCGCCGAGGGCGATCTTGCTGCCCAGGCGGTCGATGATCATGCCCATTGGCAACTGGGCAAAGGCATAGGCAATGGAAAACGCCGACAACAGGATGCCCATCTGCGACGGGCTGATCATCATGTCT < NC_002947/3239129‑3238983 tctACTTCCTGGACCGTAGTGCGCTGTCGATCGCCAACACCTCCATCGAGAATGACATGATGATCTCCGCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGAC < 4:4030/146‑1TCAACTACCTGGACCGTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGAC > 4:300053/1‑149 AACTACCTGGACCGTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCG > 1:355837/1‑149 AACTACCTGGACCGTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCG > 5:361448/1‑149 CCTGGACCGTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGG < 2:211095/149‑1 CTGGACCGTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGAACAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGG > 1:138641/1‑149 atcagccGCCCGCCGCAGATGGGCATCCTGGTCTCGGCGTTTTCCATTGCCTAGGCCTTTGCACAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAACCGACCAGCCCAGCAACGACGCGCCGAGGGCGATCTTGCTGCCCAGGC < 4:293008/142‑1 GATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAACCGACCAGCCCAGCAACGACGCGCCGAGGGCGATCTTGCTGCCCAGG < 3:69935/146‑1 GATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAACCGACCAGCCCAGCAACGACGCGCCGAGGGCGATCTTGCTGCCCAGG > 4:69935/1‑146 GCCTGGGCAACCGACCAGCCCAGCAACGACGCGCCGAGGGCGATCTTGCTGCCCAGGCGGTCGATGATCATGCCCATTGGCAACTGGGCAAAGGCATAGGCAATGGAAAACGCCGACAACAGGATGCCCATCTGCGACGGGCTGATCA > 2:358774/1‑148 GGCAACCGACCAGCCCAGCAACGACGCGCCGAGGGCGATCTTGCTGCCCAGGCGGTCGATGATCATGCCCATTGGCAACTGGGCAAAGGCATAGGCAATGGAAAACGCCGACAACAGGATGCCCATCTGCGACGGGCTGATCATCAT < 4:144329/147‑1 CAACCGACCAGCCCAGCAACGACGCGCCGAGGGCGATCTTGCTGCCCAGGCGGTCGATGATCATGCCCATTGGCAACTGGGCAAAGGCATAGGCAATGGAAAACGCCGACAACAGGATGCCCATCTGCGACGGGCTGATCATCATGTCT > 6:153657/1‑149 TCAACTACCTGGACCGTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3238931‑3239089‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcctgggcaACCGACCAGCCCAGCAACGACGCGCCGAGGGCGATCTTGCTGCCCAGGCGGTCGATGATCATGCCCATTGGCAACTGGGCAAAGGCATAGGCAATGGAAAACGCCGACAACAGGATGCCCATCTGCGACGGGCTGATCATCATGTCT < NC_002947/3239129‑3238983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |