| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3239089 | 44 (0.750) | 3 (0.060) | 3/240 | NT | 7.5% | coding (220/1311 nt) | PP_2837 | uronate transporter |
| ? | NC_002947 | = 3239129 | 34 (0.630) | coding (260/1311 nt) | PP_2837 | uronate transporter | |||||
ACCGTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATT > NC_002947/3238943‑3239237 | aCCGTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGAACAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGgcagc < 2:138641/149‑1 (MQ=255) gTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAg < 5:81649/149‑1 (MQ=255) aGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGgcagc > 1:108938/1‑144 (MQ=255) gTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGAt < 3:234184/148‑1 (MQ=255) gTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATc < 7:44968/149‑1 (MQ=255) tCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCgg > 2:210906/1‑149 (MQ=255) ccAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGcgtcg > 5:174940/1‑149 (MQ=255) ccAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGcgtcg > 2:317093/1‑149 (MQ=255) acacCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTGTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTg < 5:296707/149‑1 (MQ=255) catccaGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTgctggg < 6:174940/147‑1 (MQ=255) caGAAAGACATGATGATCAGCCCGTCGCTGATGCGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGTCAGCAAGATCGCCCTCGTCGCGTCGTTGCTGGGCTGGt < 6:335774/148‑1 (MQ=255) aGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCg > 7:325086/1‑149 (MQ=255) aGAAAGACATGATGATCAGCCCGACGCAGAAGGGCATCCTGTTCTCGCCGTTTTCAAATGCCTATCCCTTTGCCCAGTAGCCAATGGGCATGATCAACGACCGCCTCGGCACCAAGATCGCACTCGGCCCGTCGTTgctgggctgttag > 3:262505/1‑145 (MQ=255) aaaGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGt > 7:76811/1‑149 (MQ=255) aGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtg > 6:153657‑M2/1‑147 (MQ=255) atgatgATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGcc < 2:282290/114‑1 (MQ=255) atgatgATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGcc > 1:282290/1‑114 (MQ=255) atgatgATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtgcc < 4:144329‑M2/147‑5 (MQ=255) atcagccgcccgccgCAGATGGGCATCCTGGTCTCGGCGTTTTCCATTGCCTAGGCCTTTGCACAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAaccgaccagcccagcaacgacgcgccgagggcgatcttgctgcccaggc < 4:293008‑M1/142‑50 (MQ=255) tgatCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtgcccaggc > 2:358774‑M2/1‑139 (MQ=255) gatCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAaccgaccagcccagcaacgacgcgccgagggcgatcttgctgcccagg < 3:69935‑M1/146‑49 (MQ=255) gatCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAaccgaccagcccagcaacgacgcgccgagggcgatcttgctgcccagg > 4:69935‑M1/1‑98 (MQ=255) gCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGttt > 3:177264/1‑149 (MQ=255) gCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGttt < 6:361448/149‑1 (MQ=255) gCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGttt < 1:210906/149‑1 (MQ=255) gCCCGTCGCAGATGGGCATCCTGTTGTCCGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGttt > 1:209711/1‑149 (MQ=255) gCCCGTCGCACATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGCGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGttt < 6:86884/149‑1 (MQ=255) gCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATgg < 1:333240/149‑1 (MQ=255) cTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGc < 1:187929/149‑1 (MQ=255) tgttgtCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGcc > 3:329505/1‑149 (MQ=255) tCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGttt > 6:362239/1‑149 (MQ=255) tCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGtt < 1:317093/148‑1 (MQ=255) cGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGtt < 6:234140/138‑1 (MQ=255) cGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGtt > 5:234140/1‑138 (MQ=255) ggCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCa < 3:300053/149‑1 (MQ=255) gggTTTTGCATTGCCTATTCCTTTGGCCAGTTTCCAATGGGCATGATATTCGTCCGACTTGGGAGCAAGATCGCCCTCGGCGCGGGGTTTCTTGGGTGGTCGGTTGGCCAGGCGGCGTTTGGCATGTTCAACAGTTTTGCCGGTTTCAt < 8:76811/147‑1 (MQ=255) gCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCaa < 4:134224/68‑1 (MQ=255) gCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCaa > 3:134224/1‑68 (MQ=255) cGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATg < 2:108938/149‑1 (MQ=255) tCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGc < 4:177264/148‑1 (MQ=255) cATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGc > 2:240407/1‑149 (MQ=255) ccTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGgtg > 2:221847/1‑149 (MQ=255) cTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTgg < 5:362239/149‑1 (MQ=255) tGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTggg < 6:280259/147‑1 (MQ=255) gCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTgctgggc > 1:196974/1‑72 (MQ=255) gCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTgctgggc < 2:196974/72‑1 (MQ=255) ccAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTg < 3:144329/149‑1 (MQ=255) gCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAg < 2:355837/148‑1 (MQ=255) aTGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGgt > 5:67707/1‑119 (MQ=255) aTGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGgt < 6:67707/119‑1 (MQ=255) gATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTcc > 6:185001/1‑149 (MQ=255) gATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTcc > 5:175387/1‑149 (MQ=255) tcatcGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTgggg < 3:292640/125‑1 (MQ=255) tcatcGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTgggg > 4:292640/1‑125 (MQ=255) cggcTGGGCATCAAGATCGGCCGCGGCGCGGCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAAGAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGTGGCGCCGATGTTCGCATCggcggc < 4:262505/146‑1 (MQ=255) gCCTGGGCAaccgaccagcccagcaacgacgcgccgagggcgatcttgctgcccaggcggtcgatgatcatgcccattggcaactgggcaaaggcataggcaatggaaaacgccgacaacaggatgcccatctgcgacgggctgatca > 2:358774‑M1/1‑9 (MQ=255) gCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtgcccaggcggtcgatgatcatgcccattggcaactgtgcaaaggcctaggcaatggaaaacgccgagaccaggatgcccatctgcggcgggcggctgat < 4:293008‑M2/149‑101 (MQ=255) ccTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtgcccaggcggtcgatgatcatgcccattggcaactgggcaaaggcataggcaatggaaaacgccgacaacaggatgcccatctgcgacgggctgatc < 3:69935‑M2/146‑99 (MQ=255) ccTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtgcccaggcggtcgatgatcatgcccattggcaactgggcaaaggcataggcaatggaaaacgccgacaacaggatgcccatctgcgacgggctgatc > 4:69935‑M2/1‑48 (MQ=255) ggCAaccgaccagcccagcaacgacgcgccgagggcgatcttgctgcccaggcggtcgatgatcatgcccattggcaactgggcaaaggcataggcaatggaaaacgccgacaacaggatgcccatctgcgacgggctgatcatcat < 4:144329‑M1/147‑144 (MQ=255) cAaccgaccagcccagcaacgacgcgccgagggcgatcttgctgcccaggcggtcgatgatcatgcccattggcaactgggcaaaggcataggcaatggaaaacgccgacaacaggatgcccatctgcgacgggctgatcatcatgtct > 6:153657‑M1/1‑2 (MQ=255) agcaAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCAtt > 2:363643/1‑149 (MQ=255) | ACCGTAGTGCGCTGTCGATCGCCAACACCTCCATCCAGAAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATT > NC_002947/3238943‑3239237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |