New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3239089	44 (0.750)	3 (0.060)	3/240	NT	7.5%	coding (220/1311 nt)	PP_2837	uronate transporter
	?	NC_002947	= 3239129	34 (0.630)					coding (260/1311 nt)	PP_2837	uronate transporter

AAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGTCAGAGTGGTTCGACGCCAACGAGCGCG  >  NC_002947/3238981‑3239266                                                                                                                                                     |                                                                                                                                          aaaGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGt                                                                                                                                           >  7:76811/1‑149 (MQ=255)   aGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtg                                                                                                                                         >  6:153657‑M2/1‑147 (MQ=255)       atgatgATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtgcc                                                                                                                                       <  4:144329‑M2/147‑5 (MQ=255)           tgatCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtgcccaggc                                                                                                                                  >  2:358774‑M2/1‑139 (MQ=255)                 gCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGttt                                                                                                                           >  3:177264/1‑149 (MQ=255)                 gCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGttt                                                                                                                           <  1:210906/149‑1 (MQ=255)                 gCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGttt                                                                                                                           <  6:361448/149‑1 (MQ=255)                 gCCCGTCGCAGATGGGCATCCTGTTGTCCGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGttt                                                                                                                           >  1:209711/1‑149 (MQ=255)                 gCCCGTCGCACATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGCGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGttt                                                                                                                           <  6:86884/149‑1 (MQ=255)                        gCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATgg                                                                                                                    <  1:333240/149‑1 (MQ=255)                                     cTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGc                                                                                                       <  1:187929/149‑1 (MQ=255)                                      tgttgtCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGcc                                                                                                      >  3:329505/1‑149 (MQ=255)                                           tCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGttt                                                                                                 >  6:362239/1‑149 (MQ=255)                                           tCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGtt                                                                                                  <  1:317093/148‑1 (MQ=255)                                            cGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGtt                                                                                                           <  6:234140/138‑1 (MQ=255)                                            cGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGtt                                                                                                           >  5:234140/1‑138 (MQ=255)                                             ggCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCa                                                                                               <  3:300053/149‑1 (MQ=255)                                              gggTTTTGCATTGCCTATTCCTTTGGCCAGTTTCCAATGGGCATGATATTCGTCCGACTTGGGAGCAAGATCGCCCTCGGCGCGGGGTTTCTTGGGTGGTCGGTTGGCCAGGCGGCGTTTGGCATGTTCAACAGTTTTGCCGGTTTCAt                                                                                              <  8:76811/147‑1 (MQ=255)                                               cGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATg                                                                                             <  2:108938/149‑1 (MQ=255)                                                    tCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGc                                                                                         <  4:177264/148‑1 (MQ=255)                                                      cATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGc                                                                                      >  2:240407/1‑149 (MQ=255)                                                           ccTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGgtg                                                                                 >  2:221847/1‑149 (MQ=255)                                                                  cTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTgg                                                                          <  5:362239/149‑1 (MQ=255)                                                                     tGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTggg                                                                         <  6:280259/147‑1 (MQ=255)                                                                        ccAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTg                                                                    <  3:144329/149‑1 (MQ=255)                                                                              gCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAg                                                               <  2:355837/148‑1 (MQ=255)                                                                                        aTGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGgt                                                                                  <  6:67707/119‑1 (MQ=255)                                                                                        aTGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGgt                                                                                  >  5:67707/1‑119 (MQ=255)                                                                                          gATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTcc                                                  >  6:185001/1‑149 (MQ=255)                                                                                          gATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTcc                                                  >  5:175387/1‑149 (MQ=255)                                                                                            tcatcGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTgggg                                                                        <  3:292640/125‑1 (MQ=255)                                                                                            tcatcGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTgggg                                                                        >  4:292640/1‑125 (MQ=255)                                                                                                    cggcTGGGCATCAAGATCGGCCGCGGCGCGGCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAAGAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGTGGCGCCGATGTTCGCATCggcggc                                        <  4:262505/146‑1 (MQ=255)                                                                                                     gCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtgcccaggcggtcgatgatcatgcccattggcaactgtgcaaaggcctaggcaatggaaaacgccgagaccaggatgcccatctgcggcgggcggctgat                                       <  4:293008‑M2/149‑101 (MQ=255)                                                                                                      ccTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtgcccaggcggtcgatgatcatgcccattggcaactgggcaaaggcataggcaatggaaaacgccgacaacaggatgcccatctgcgacgggctgatc                                         >  4:69935‑M2/1‑48 (MQ=255)                                                                                                      ccTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTtgcccaggcggtcgatgatcatgcccattggcaactgggcaaaggcataggcaatggaaaacgccgacaacaggatgcccatctgcgacgggctgatc                                         <  3:69935‑M2/146‑99 (MQ=255)                                                                                                             agcaAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCAtt                               >  2:363643/1‑149 (MQ=255)                                                                                                               caAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGt                             <  1:240407/149‑1 (MQ=255)                                                                                                                        ccTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGTCAGAGTGGt                    >  3:225876/1‑149 (MQ=255)                                                                                                                          tCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGTCAGAGTGGTTc                  <  4:329505/149‑1 (MQ=255)                                                                                                                            ggCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGTCAGAGTGGTTc                  <  1:221847/147‑1 (MQ=255)                                                                                                                             gcgcGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGTCAGAGTGGTTCGAc               <  1:363643/149‑1 (MQ=255)                                                                                                                               gcgTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGTCAGAGTGGTTCGACGc             >  6:162698/1‑149 (MQ=255)                                                                                                                                        ctgggctggTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGTCAGAGTGGTTCGACGCCAACGAgcg    >  6:52846/1‑149 (MQ=255)                                                                                                                                         ggggctggTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGTCAGAGTGGTTCGACGCCAACGAgcgc   <  3:249494/148‑1 (MQ=255)                                                                                                                                          gggctggTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGTCAGAGTGGTTCGACGCCAACGAGcgcg  >  4:50368/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                          AAAGACATGATGATCAGCCCGTCGCAGATGGGCATCCTGTTGTCGGCGTTTTCCATTGCCTATGCCTTTGCCCAGTTGCCAATGGGCATGATCATCGACCGCCTGGGCAGCAAGATCGCCCTCGGCGCGTCGTTGCTGGGCTGGTCGGTTGCCCAGGCGGCGTTTGGCATGGTCAACAGTTTTGCCGGTTTCATGGGGCTGCGGGTGTTGCTGGGGATTGGCGAGGCGCCGATGTTCCCATCGGCGGCCAAAGCATTGTCAGAGTGGTTCGACGCCAACGAGCGCG  >  NC_002947/3238981‑3239266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.