| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3262119 | 49 (0.830) | 3 (0.050) | 3/248 | NT | 6.0% | coding (7/570 nt) | PP_2859 | hypothetical protein |
| ? | NC_002947 | = 3262145 | 48 (0.860) | coding (544/567 nt) | PP_2860 | nicotinamide mononucleotide transporter | |||||
GCAGGTGTCGCGGCATTGCTGGTCGATGAAATGACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3261970‑3262119‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcGACCCGGCGGTGGTACAGCCATGAGTGCGCCGCAAGCAATGAAAGTGCTGGTACTGTGCGGCCCAGAATCCAGTGGCAAAAGCTGGCTTAGCGGGGTGATCCAGGCACATTTTGGTGGCCTGGTGGTGGGCGAATACGTGCGTC < NC_002947/3262145‑3262002 GCAGGTGTCGCGGCATTGCTGGTCGATGAAATGACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGC < 2:211052/148‑1GCAGGTGTCGCGGCATTGCTGGTCGATGAAATGACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGC < 5:351219/148‑1 CACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCGTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCGACCCGGCGGTGGTACAGCCATGAGTGCGCCGCAA < 6:84080/149‑1 TTCGCGCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCGACCCGGCGGTGGTACAGCCATGAGTGCGCCGC > 6:299157/1‑141 TTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCGACCCGGCGGTGGTACAGCCATGAGTGCGCCGC < 5:299157/141‑1 CCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGC > 5:186866/1‑92 CCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGC < 6:186866/92‑1 GCGGCGCGACCCGGCGGTGGTACAGCCATGAGTGCGCCGCAAGCAATGAAAGTGCTGGTACTGTGCGGCCCAGAATCCAGTGGCAAAAGCTGGCTTAGCGGGGTGATCCAGGCACATTTTGGTGGCCTGGTGGTGGGCGAATACGTGCG > 5:87551/1‑149 GGCGCGACCCGGCGGTGGTACAGCCATGAGTGCGCCGCAAGCAATGAAAGTGCTGGTACTGTGCGGCCCAGAATCCAGTGGCAAAAGCTGGCTTAGCGGGGTGATCCAGGCACATTTTGGTGGCCTGGTGGTGGGCGAATACGTGCGTC < 3:214072/149‑1 GCAGGTGTCGCGGCATTGCTGGTCGATGAAATGACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3261970‑3262119‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcGACCCGGCGGTGGTACAGCCATGAGTGCGCCGCAAGCAATGAAAGTGCTGGTACTGTGCGGCCCAGAATCCAGTGGCAAAAGCTGGCTTAGCGGGGTGATCCAGGCACATTTTGGTGGCCTGGTGGTGGGCGAATACGTGCGTC < NC_002947/3262145‑3262002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |