| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3262119 | 49 (0.830) | 3 (0.050) | 3/248 | NT | 6.0% | coding (7/570 nt) | PP_2859 | hypothetical protein |
| ? | NC_002947 | = 3262145 | 48 (0.860) | coding (544/567 nt) | PP_2860 | nicotinamide mononucleotide transporter | |||||
TCGCGGCATTGCTGGTCGATGAAATGACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCCA > NC_002947/3261977‑3262265 | tCGCGGCATTGCTGGTCGATGAAATGACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCAt > 1:340879/1‑149 (MQ=255)gcgcgGCATTGCTGGTCGATGAAATGACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCAt < 8:162838/148‑1 (MQ=255) gcgGCATTGGTGGTCGATGAAATGACGGACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCAGCCCGCTACGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCTGCACTTTCTTTGCTTGCGGCGCACTCATgg < 6:251151/149‑1 (MQ=255) gcgGCATTGCTGGTCGATGAAATGACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATgg < 2:200971/149‑1 (MQ=255) cATTGCTGGTCGATGAAATGACGCACGTATTCTCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGt < 3:111811/149‑1 (MQ=255) gTCGATGAAATGACGCACGTATTCGCCCACCACCACGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCAccgc < 7:240507/149‑1 (MQ=255) gACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTac < 4:148635/132‑1 (MQ=255) gACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTac > 3:148635/1‑132 (MQ=255) gACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCgcgcc < 3:214072‑M2/149‑6 (MQ=255) cGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCgcgccgc > 5:87551‑M2/1‑142 (MQ=255) cACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCGTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCgacccggcggtggtacagccatgagtgcgccgcaa < 6:84080‑M1/149‑36 (MQ=255) aCGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCAt > 1:48566/1‑149 (MQ=255) ttCGCGCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCgacccggcggtggtacagccatgagtgcgccgc > 6:299157‑M1/1‑108 (MQ=255) ttCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCgacccggcggtggtacagccatgagtgcgccgc < 5:299157‑M1/141‑34 (MQ=255) cccACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTccagccag > 2:301914/1‑149 (MQ=255) ccaccaccaGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTc > 4:319737/1‑141 (MQ=255) ccaccaccaGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTc < 3:319737/141‑1 (MQ=255) caccaccaGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCagccagcc > 4:53546/1‑149 (MQ=255) caccacGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCcgcg < 4:245722/149‑1 (MQ=255) caGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGAGCCGCCATTCCAGCCAGCCGCGTAc > 2:62204/1‑149 (MQ=255) ccaccaAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGC > 5:186866‑M1/1‑92 (MQ=255) ccaccaAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGC < 6:186866‑M1/92‑1 (MQ=255) caccaAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCaa > 8:43134/1‑149 (MQ=255) ccaAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATc < 7:43134/149‑1 (MQ=255) aaaTGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAgg < 4:101816/149‑1 (MQ=255) tgtgCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGt > 5:355166/1‑148 (MQ=255) tgtgCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTg < 4:349045/149‑1 (MQ=255) tGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACgg > 3:215771/1‑132 (MQ=255) tGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACgg < 4:215771/132‑1 (MQ=255) gATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACgg < 6:355166/148‑1 (MQ=255) gATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGc < 1:301914/149‑1 (MQ=255) aCCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGTGCGCACAGTACCAGCACTTTCTTTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGGCGCCATTCCAGCCAGCCGCGTACGTCAATCAGGGTGAGCACGGCgaa < 6:134280/148‑1 (MQ=255) aCCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCgaa < 3:53546/148‑1 (MQ=255) gCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAgg < 5:159897/129‑1 (MQ=255) gCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAgg > 6:159897/1‑129 (MQ=255) ccAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGt > 5:347571/1‑149 (MQ=255) gCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAg > 1:183853/1‑149 (MQ=255) cTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAgctgc < 4:214072/149‑1 (MQ=255) cTGGATTCGGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAgctgc < 2:340879/149‑1 (MQ=255) gATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGa < 1:223882/149‑1 (MQ=255) cTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGc < 2:48566/148‑1 (MQ=255) gggCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAgg > 6:163210/1‑149 (MQ=255) ccGCACAGTACAAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTAt > 3:164783/1‑149 (MQ=255) gCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTg < 6:347571/149‑1 (MQ=255) ccAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACGGCTGCTGATGCAGGTATTGGCCcaca > 7:101376/1‑148 (MQ=255) ccAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAg > 1:128773/1‑123 (MQ=255) ccAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAg < 2:128773/123‑1 (MQ=255) ccAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCcaca > 8:306332/1‑148 (MQ=255) gCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATg > 1:69669/1‑129 (MQ=255) gCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATg < 2:69669/129‑1 (MQ=255) aCTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACAt > 3:97140/1‑144 (MQ=255) aCTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACAt < 4:97140/144‑1 (MQ=255) cttgcGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGAcc < 1:186087/148‑1 (MQ=255) cttgcGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCa > 7:284107/1‑149 (MQ=255) cttgcGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCa < 3:18533/149‑1 (MQ=255) ttgcGGCGCACTCATGGCTGTACCACCGCCGGGTCgcgccgcaagcaatgaaagtgctggtactgtgcggcccagaatccagtggcaaacgctggcttagcggggtgatccaggcacattttggtggcctggtggtgggcgaatacgtg < 6:84080‑M2/149‑115 (MQ=255) gcggcgCgacccggcggtggtacagccatgagtgcgccgcaagcaatgaaagtgctggtactgtgcggcccagaatccagtggcaaaagctggcttagcggggtgatccaggcacattttggtggcctggtggtgggcgaatacgtgcg > 5:87551‑M1/1‑7 (MQ=255) gcggcgCACTCATGGCTGTACCACCGCCGGGTCgcgccgcaagcaatgaaagtgctggtactgtgcggcccagaatccagtggcaaaagctggcttagcggggtgatccaggcacattttggtggcctggtggtgggcgaa < 5:299157‑M2/141‑109 (MQ=255) gcggcgCACTCATGGCTGTACCACCGCCGGGTCgcgccgcaagcaatgaaagtgctggtactgtgcggcccagaatccagtggcaaaagctggcttagcggggtgatccaggcacattttggtggcctggtggtgcgcgaa > 6:299157‑M2/1‑33 (MQ=255) cggcgCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGa < 7:306332/148‑1 (MQ=255) ggcgCgacccggcggtggtacagccatgagtgcgccgcaagcaatgaaagtgctggtactgtgcggcccagaatccagtggcaaaagctggcttagcggggtgatccaggcacattttggtggcctggtggtgggcgaatacgtgcgtc < 3:214072‑M1/149‑145 (MQ=255) ggcgCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATc > 2:123229/1‑149 (MQ=255) cgcACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCca > 7:16189/1‑149 (MQ=255) | TCGCGGCATTGCTGGTCGATGAAATGACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCCA > NC_002947/3261977‑3262265 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |