New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3262119	49 (0.830)	3 (0.050)	3/248	NT	6.0%	coding (7/570 nt)	PP_2859	hypothetical protein
	?	NC_002947	= 3262145	48 (0.860)					coding (544/567 nt)	PP_2860	nicotinamide mononucleotide transporter

GACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCCACAGTGGCCAGCACTGCAGGCGTTTC  >  NC_002947/3262002‑3262290                                                                                                                                                |                                                                                                                                                  gACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCgcgcc                                                                                                                                              <  3:214072‑M2/149‑6 (MQ=255)   cGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCgcgccgc                                                                                                                                            >  5:87551‑M2/1‑142 (MQ=255)      aCGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCAt                                                                                                                                         >  1:48566/1‑149 (MQ=255)               cccACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTccagccag                                                                                                                                >  2:301914/1‑149 (MQ=255)                ccaccaccaGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTc                                                                                                                                       >  4:319737/1‑141 (MQ=255)                ccaccaccaGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTc                                                                                                                                       <  3:319737/141‑1 (MQ=255)                 caccaccaGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCagccagcc                                                                                                                              >  4:53546/1‑149 (MQ=255)                    caccacGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCcgcg                                                                                                                           <  4:245722/149‑1 (MQ=255)                       caGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGAGCCGCCATTCCAGCCAGCCGCGTAc                                                                                                                        >  2:62204/1‑149 (MQ=255)                            caccaAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCaa                                                                                                                   >  8:43134/1‑149 (MQ=255)                              ccaAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATc                                                                                                                 <  7:43134/149‑1 (MQ=255)                                 aaaTGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAgg                                                                                                              <  4:101816/149‑1 (MQ=255)                                    tgtgCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGt                                                                                                            >  5:355166/1‑148 (MQ=255)                                    tgtgCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTg                                                                                                           <  4:349045/149‑1 (MQ=255)                                          tGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACgg                                                                                                                      >  3:215771/1‑132 (MQ=255)                                          tGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACgg                                                                                                                      <  4:215771/132‑1 (MQ=255)                                            gATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACgg                                                                                                    <  6:355166/148‑1 (MQ=255)                                            gATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGc                                                                                                   <  1:301914/149‑1 (MQ=255)                                                aCCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGTGCGCACAGTACCAGCACTTTCTTTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGGCGCCATTCCAGCCAGCCGCGTACGTCAATCAGGGTGAGCACGGCgaa                                                                                                <  6:134280/148‑1 (MQ=255)                                                aCCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCgaa                                                                                                <  3:53546/148‑1 (MQ=255)                                                     gCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAgg                                                                                                              <  5:159897/129‑1 (MQ=255)                                                     gCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAgg                                                                                                              >  6:159897/1‑129 (MQ=255)                                                           ccAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGt                                                                                    >  5:347571/1‑149 (MQ=255)                                                                    gCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAg                                                                           >  1:183853/1‑149 (MQ=255)                                                                        cTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAgctgc                                                                       <  4:214072/149‑1 (MQ=255)                                                                        cTGGATTCGGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAgctgc                                                                       <  2:340879/149‑1 (MQ=255)                                                                           gATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGa                                                                    <  1:223882/149‑1 (MQ=255)                                                                               cTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGc                                                                 <  2:48566/148‑1 (MQ=255)                                                                                 gggCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAgg                                                              >  6:163210/1‑149 (MQ=255)                                                                                    ccGCACAGTACAAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTAt                                                           >  3:164783/1‑149 (MQ=255)                                                                                      gCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTg                                                         <  6:347571/149‑1 (MQ=255)                                                                                              ccAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACGGCTGCTGATGCAGGTATTGGCCcaca                                                  >  7:101376/1‑148 (MQ=255)                                                                                              ccAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAg                                                                           >  1:128773/1‑123 (MQ=255)                                                                                              ccAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAg                                                                           <  2:128773/123‑1 (MQ=255)                                                                                              ccAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCcaca                                                  >  8:306332/1‑148 (MQ=255)                                                                                                 gCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATg                                                                  <  2:69669/129‑1 (MQ=255)                                                                                                 gCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATg                                                                  >  1:69669/1‑129 (MQ=255)                                                                                                   aCTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACAt                                                 <  4:97140/144‑1 (MQ=255)                                                                                                   aCTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACAt                                                 >  3:97140/1‑144 (MQ=255)                                                                                                             cttgcGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGAcc                                   <  1:186087/148‑1 (MQ=255)                                                                                                             cttgcGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCa                                  >  7:284107/1‑149 (MQ=255)                                                                                                             cttgcGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCa                                  <  3:18533/149‑1 (MQ=255)                                                                                                              ttgcGGCGCACTCATGGCTGTACCACCGCCGGGTCgcgccgcaagcaatgaaagtgctggtactgtgcggcccagaatccagtggcaaacgctggcttagcggggtgatccaggcacattttggtggcctggtggtgggcgaatacgtg                                 <  6:84080‑M2/149‑115 (MQ=255)                                                                                                                gcggcgCACTCATGGCTGTACCACCGCCGGGTCgcgccgcaagcaatgaaagtgctggtactgtgcggcccagaatccagtggcaaaagctggcttagcggggtgatccaggcacattttggtggcctggtggtgggcgaa                                       <  5:299157‑M2/141‑109 (MQ=255)                                                                                                                gcggcgCACTCATGGCTGTACCACCGCCGGGTCgcgccgcaagcaatgaaagtgctggtactgtgcggcccagaatccagtggcaaaagctggcttagcggggtgatccaggcacattttggtggcctggtggtgcgcgaa                                       >  6:299157‑M2/1‑33 (MQ=255)                                                                                                                 cggcgCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGa                               <  7:306332/148‑1 (MQ=255)                                                                                                                  ggcgCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATc                             >  2:123229/1‑149 (MQ=255)                                                                                                                    cgcACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCca                           >  7:16189/1‑149 (MQ=255)                                                                                                                           aTGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACGGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCCACAGTGGc                    <  8:101376/149‑1 (MQ=255)                                                                                                                           aTGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCCCGATCCACAGTGGc                    >  5:287392/1‑149 (MQ=255)                                                                                                                                tGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCAGATAGACGATGTCGACCACGATCCACAGTGGCCAGCa               >  4:151949/1‑149 (MQ=255)                                                                                                                                   accaccGCCGGGTCGCGCAGCCATTCCACCCAGCCGCGTACGCCAATCAGGCTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGAAATGGCCCACAAAGACGATGTCGACCACGATCCTCAGTGGCCAGCAcag            >  7:281632/1‑147 (MQ=255)                                                                                                                                     caccGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGTAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCCACAGTGGCCAGCACTGCa          <  4:164319/149‑1 (MQ=255)                                                                                                                                     caccGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCCACAGTGGCCAGCACTg            >  4:312851/1‑147 (MQ=255)                                                                                                                                      accGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCCACAGTGGCCAGCACTGCAg         <  4:164783/149‑1 (MQ=255)                                                                                                                                         gccgGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCCACAGTGGCCAGCACTGCAGGCg      >  5:245025/1‑149 (MQ=255)                                                                                                                                             ggTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCCACAGTGGCCAGCACTGCAGGCGTTTc  <  8:284107/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                  GACGCACGTATTCGCCCACCACCAGGCCACCAAAATGTGCCTGGATCACCCCGCTAAGCCAGCTTTTGCCACTGGATTCTGGGCCGCACAGTACCAGCACTTTCATTGCTTGCGGCGCACTCATGGCTGTACCACCGCCGGGTCGCGCCGCCATTCCAGCCAGCCGCGTACGGCAATCAGGGTGAGCACGGCGAAGAAGCCTGCGGTGAAATACAGCTGCTGATGCAGGTATTGGCCCACATAGACGATGTCGACCACGATCCACAGTGGCCAGCACTGCAGGCGTTTC  >  NC_002947/3262002‑3262290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.