New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3335433 =	50 (0.850)	3 (0.050)	3/254	NT	6.0%	coding (129/1704 nt)	PP_2932	amidase family protein
	?	NC_002947	3335479 =	46 (0.810)					coding (83/1704 nt)	PP_2932	amidase family protein

TGGTCAAGGCCTACCTGGCGCGCATCGACGCCTACGATGGCGCCGACACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3335485‑3335433 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAAT  >  NC_002947/3335479‑3335577                                                                                                                                                          TGGTCAAGGCCTACCTGGCGCGCATCGACGCCTACGATGGCGCCGACACGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAA      >  2:336401/1‑148   GTCAAGGCCTACCTGGCGCGCATCGACGCCTACGATGGCGCCGACACGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAA      <  1:336401/146‑1    TCAAGGCCTACCTGGCGCGCATCGACGCCTACGATGGCGCCGACACGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAAT  >  6:53496/1‑149                                                                                                                                                          TGGTCAAGGCCTACCTGGCGCGCATCGACGCCTACGATGGCGCCGACACGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3335485‑3335433 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAAT  >  NC_002947/3335479‑3335577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.