New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3335433 =50 (0.850)3 (0.050) 3/254 NT 6.0% coding (129/1704 nt) PP_2932 amidase family protein
?NC_002947 3335479 = 46 (0.810)coding (83/1704 nt) PP_2932 amidase family protein

GTCCAGCGGGCTAAGCACCTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAGTGTACAAGAAGGGCTTG  >  NC_002947/3335331‑3335620
                                                                                                                                                    |                                                                                                                                             
gTCCAGCGGGCTAAGCACCTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCt                                                                                                                                               >  8:41187/1‑149 (MQ=255)
 tCCAGCGGGCTAAGCACCTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACTGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCtt                                                                                                                                              <  1:292550/149‑1 (MQ=255)
 tCCAGCGGGCTAAGCACCTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCtt                                                                                                                                              <  7:41187/149‑1 (MQ=255)
   attttttggtgaacgcatgatcgaggtaaccgaggtttccattgccgagctgcgcgacgcgctcgagacgggccgcacaacggcggtcgagctggtcaaGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGa                                                                                                                                            >  6:53496‑M1/100‑149 (MQ=255)
     gCGGGCTAAGCACCTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGAc                                                                                                                                           >  1:26706/1‑148 (MQ=255)
       tttggtgaacgcatgatcgaggtaaccgaggtttccattgccgagctgcgcgacgcgctcgagacgggccgcacaacggcggtcgagctggtcaaGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGAc                                                                                                                                           <  1:336401‑M1/51‑1 (MQ=255)
       tttggtgaacgcatgatcgaggtaaccgaggtttccattgccgagctgcgcgacgcgctcgagacgggccgcacaacggcggtcgagctggtcaaGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCa                                                                                                                                         >  2:336401‑M1/96‑148 (MQ=255)
         gCTAAGCACCTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCt                                                                                                                                      >  6:31307/1‑149 (MQ=255)
           tAAGCACCTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTc                                                                                                                                     >  5:354658/1‑148 (MQ=255)
           tAAGCACCTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCg                                                                                                                                    >  3:306473/1‑149 (MQ=255)
                 ccTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGAccgcc                                                                                                                              >  2:154094/1‑149 (MQ=255)
                  cTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGAccgccg                                                                                                                             >  5:289107/1‑149 (MQ=255)
                      cccTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTtgt                                                                                                                         <  4:109447/149‑1 (MQ=255)
                      cccTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTtgt                                                                                                                         <  1:21665/149‑1 (MQ=255)
                       ccTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCATTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTtgtg                                                                                                                        >  5:260337/1‑149 (MQ=255)
                            gcgcGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGc                                                                                                                    <  3:163170/148‑1 (MQ=255)
                                  cggGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGtctc                                                                                                             <  6:191063/149‑1 (MQ=255)
                                   gggCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGtctc                                                                                                             >  1:111731/1‑148 (MQ=255)
                                   gggCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGtctc                                                                                                             >  4:234011/1‑148 (MQ=255)
                                   gggCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGtctc                                                                                                             <  3:234011/148‑1 (MQ=255)
                                      cATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAgc                                                                                                         <  5:31307/149‑1 (MQ=255)
                                           gAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTc                                                                                                    >  1:150274/1‑149 (MQ=255)
                                              gCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTcgcg                                                                                                 <  2:111731/149‑1 (MQ=255)
                                                   ggCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGc                                                                                             <  3:127546/148‑1 (MQ=255)
                                                     cttcttTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGtctc                                                                                                             >  4:121497/1‑130 (MQ=255)
                                                     cttcttTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGtctc                                                                                                             <  3:121497/130‑1 (MQ=255)
                                                      ttcttTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCgg                                                                                         >  7:319858/1‑149 (MQ=255)
                                                          ttCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAAt                                                                                     >  3:39427/1‑149 (MQ=255)
                                                              gcgcCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGa                                                                                  >  7:256190/1‑148 (MQ=255)
                                                              gcgcCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGAGGACCGTCTCGAGCGCGTCGCGCAGATCGGCAATGGa                                                                                  >  8:146249/1‑148 (MQ=255)
                                                                    ccGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCg                                                                           >  1:104411/1‑149 (MQ=255)
                                                                               accacTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGAt                                                                <  1:154094/149‑1 (MQ=255)
                                                                               accacTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGAt                                                                >  1:254639/1‑149 (MQ=255)
                                                                                      cGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCg                                                          <  2:26706/148‑1 (MQ=255)
                                                                                      cGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGt                                                         >  7:156331/1‑149 (MQ=255)
                                                                                         cattAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCa                                                      <  6:260337/147‑1 (MQ=255)
                                                                                           ttAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCAc                                                     >  2:50265/1‑148 (MQ=255)
                                                                                               tggtcaaggcctacctggcgcgcatcgacgcctacgatggcgccgacacggccTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCaaa                                                 >  2:336401‑M2/54‑148 (MQ=255)
                                                                                                 gtcaaggcctacctggcgcgcatcgacgcctacgatggcgccgacacggccTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCaaa                                                 <  1:336401‑M2/95‑1 (MQ=255)
                                                                                                  tcaaggcctacctggcgcgcatcgacgcctacgatggcgccgacacggccTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAAt                                             >  6:53496‑M2/51‑149 (MQ=255)
                                                                                                   aGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCTGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAAtg                                            <  5:234837/149‑1 (MQ=255)
                                                                                                             tCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTggg                                  <  8:319858/149‑1 (MQ=255)
                                                                                                              cGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTgggg                                 >  1:138277/1‑149 (MQ=255)
                                                                                                               ggCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTgggg                                 <  6:319797/148‑1 (MQ=255)
                                                                                                                gcgcCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGc                               >  2:216476/1‑149 (MQ=255)
                                                                                                                gcgcCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGc                               <  6:354658/149‑1 (MQ=255)
                                                                                                                    cATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCCCCAAAAAATGTGCAGGTGGGGGCTAAt                           >  2:188890/1‑149 (MQ=255)
                                                                                                                       cGTAGGCGTCGATGCGAGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGc                         >  6:380659/1‑148 (MQ=255)
                                                                                                                           ggCGTCTATGCGCGCCATGGAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGGCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCgagga                    <  4:39427/149‑1 (MQ=255)
                                                                                                                             cGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCTCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCTTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAgt                  <  7:146249/149‑1 (MQ=255)
                                                                                                                              gTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAgtg                 <  8:256190/149‑1 (MQ=255)
                                                                                                                               tCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAgtgt                <  2:150274/149‑1 (MQ=255)
                                                                                                                               tCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAgtgt                <  5:380659/149‑1 (MQ=255)
                                                                                                                               tCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAgtgt                <  2:104411/149‑1 (MQ=255)
                                                                                                                                 gATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAGTGTa               <  4:306473/148‑1 (MQ=255)
                                                                                                                                 gATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAGTGTAc              <  8:156331/149‑1 (MQ=255)
                                                                                                                                            ggTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAGTGTACAAGAAGGGCtt   >  2:279535/1‑149 (MQ=255)
                                                                                                                                             gTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTggggg                                <  4:81039/119‑1 (MQ=255)
                                                                                                                                             gTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTggggg                                >  3:81039/1‑119 (MQ=255)
                                                                                                                                             gTAGGCCTTGACCAGCTCGACCGCCGTTGTCCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAGTGTACAAGAAGGGCTTg  >  1:29693/1‑149 (MQ=255)
                                                                                                                                               aGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCgagga                    <  4:92943/129‑1 (MQ=255)
                                                                                                                                               aGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCgagga                    >  3:92943/1‑129 (MQ=255)
                                                                                                                                                    |                                                                                                                                             
GTCCAGCGGGCTAAGCACCTGGCCCTTGGCGCGGCGGGCATCGGAGGCCTCGGCTTCTTTCAGCGCCTCCGGGTTGCGCACCACTACGGCGTTAAGGGCAGTGGCCGTGTCGGCGCCATCGTAGGCGTCGATGCGCGCCAGGTAGGCCTTGACCAGCTCGACCGCCGTTGTGCGGCCCGTCTCGAGCGCGTCGCGCAGCTCGGCAATGGAAACCTCGGTTACCTCGATCATGCGTTCACCAAAAAATGTGCAGGTGGGGGCTAATGCGAGGAGTGTACAAGAAGGGCTTG  >  NC_002947/3335331‑3335620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.