| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3444269 = | 41 (0.700) | 4 (0.070) | 4/246 | NT | 9.1% | coding (3028/3270 nt) | PP_3062 | tail length determination protein |
| ? | NC_002947 | 3444330 = | 41 (0.740) | coding (3089/3270 nt) | PP_3062 | tail length determination protein | |||||
CCATTTCGTTCAGCAATTGGTTTGGGTCTTTAACATCGCCATGGACAGTGAGCGGCATAACCGGGGCGAATGTGAATGTGTTGTCCACCTTCGGCGCCGGTGGCGGTGAGGCCTTAGCAGGTGGCGGCACCTCCGGCAGCTTGGGCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3444419‑3444269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccgaAGGTGGACAACACATTCACATTCGCCCCGGTTATGCCGCTCACTGTCCATGGCGATGTTAAAGACCCAAACCAATTGCTGAACGAAATGGCAAACGGTATGCGCGGGCTGTTTGACGCCTGGCAGCGCGAGGTGGCTGCGCGCACGT > NC_002947/3444330‑3444476 CCATTTCGTTCAGCAATTGGTTTGGGTCTTTAACATCGCCATGGACAGTGAGCGGCATAACCGGGGCGAATGTGAATGTGTTGTCCACCTTCGGCGCCGGTGGCGGTGAGGCCTTAGCAGGTGGCGGCACCTCCGGCAGCTTGGGCGC < 1:64527/148‑1 CATTTCGTTCAGCAATTGGTTTGGGTCTTTAACATCGCCATGGACAGTGAGCGGCATAACCGGGGCGAATGTGAATGTGTTGTCCACCTTCGGCGCCGGTGGCGGTGAGGCCTTAGCAGGTGGCGGCACCTCCGGCAGCTTGGGCGCC > 8:161009/1‑148 CACCTTCGGCGCCGGTGGCGGTGAGGCCTTAGCAGGTGGCGGCACCTCCGGCAGCTTGGGCGCCGAAGGTGGACAACACATTCACATTCGCCCCGGTTATGCCGCTCACTGTCCATGGCGATGTTAAAGACCCAAACCAATTGCTGAAC > 7:315477/1‑149 CTTCGGCGCCGGTGGCGGTGAGGCCTTAGCAGGTGGCGGCACCTCCGGCAGCTTGGGCGCCGAAGGTGGACAACACATTCACATTCGCCCCGGTTATGCCGCTCACTGTCCATGGCGATGTTAAAGACC > 7:49390/1‑129 CTTCGGCGCCGGTGGCGGTGAGGCCTTAGCAGGTGGCGGCACCTCCGGCAGCTTGGGCGCCGAAGGTGGACAACACATTCACATTCGCCCCGGTTATGCCGCTCACTGTCCATGGCGATGTTAAAGACC < 8:49390/129‑1 CGGCAGCTTGGGCGCCGAAGGTGGACAACACATTCACATTCGCCCCGGTTATGCCGCTCACTGTCCATGGCGATGTTAAAGACCCAAACCAATTGCTGAACGAAATGGCAAACGGTATGCGCGGGCTGTTTGACGCCTGGCAGCGCGAG < 8:315477/149‑1 CGCCGAAGGTGGACAACACATTCACATTCGCCCCGGTTATGCCGCTCACTGTCCATGGCGATGTTAAAGACCCAAACCAATTGCTGAACGAAATGGCAAACGGTATGCGCGGGCTGTTTGACGCCTGGCAGCGCGAGGTGGCTGCGCGC < 3:29841/149‑1 GAAGGTGGACAACACATTCACATTCGCCCCGGTTATGCCGCTCACTGTCCATGGCGATGTTAAAGACCCAAACCAATTGCTGAACGAAATGGCAAACGGTATGCGCGGGCTGTTTGACGCCTGGCAGCGCGAGGTGGCTGCGCGCACGT > 1:81043/1‑149 CCATTTCGTTCAGCAATTGGTTTGGGTCTTTAACATCGCCATGGACAGTGAGCGGCATAACCGGGGCGAATGTGAATGTGTTGTCCACCTTCGGCGCCGGTGGCGGTGAGGCCTTAGCAGGTGGCGGCACCTCCGGCAGCTTGGGCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3444419‑3444269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccgaAGGTGGACAACACATTCACATTCGCCCCGGTTATGCCGCTCACTGTCCATGGCGATGTTAAAGACCCAAACCAATTGCTGAACGAAATGGCAAACGGTATGCGCGGGCTGTTTGACGCCTGGCAGCGCGAGGTGGCTGCGCGCACGT > NC_002947/3444330‑3444476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |