New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3529839	35 (0.590)	3 (0.050)	3/246	NT	7.4%	coding (1656/3102 nt)	dnaEB	error‑prone DNA polymerase
	?	NC_002947	= 3529872	42 (0.760)					coding (1689/3102 nt)	dnaEB	error‑prone DNA polymerase

GAGAATGCCGCGATGCCGGAGCGCACGGTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3529690‑3529839 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggccggGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCACGGTGGTGCTGCAGCTGGTCGAAGCAGCGACGCAAGGCGCTGAGCATGCCCAACGCCAGTACGTCGACCTTGAGCAGGCCAACCATGTCCAGGTCATCCTTGTCC  <  NC_002947/3529872‑3529728                                                                                                                                                                                                                                                                                                         GAGAATGCCGCGATGCCGGAGCGCACGGTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCG                                                                                                                                                    >  3:309522/1‑149                                           AAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCAC                                                                                                          <  4:309522/149‑1                                                                   CTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCACGGTG                                                                                                      <  1:86196/129‑1                                                                   CTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCACGGTG                                                                                                      >  2:86196/1‑129                                                                                                                                               GTGGCCGGGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCACGGTGGTGCTGCAGCTGGTCGAAGCAGCGACGCAAGGCGCTGAGCATGCCCAACGCCAGTACGTCGACCTTGAGAAGGCCAACCATGTCCAGGTCATCCTT      >  8:26947/1‑149                                                                                                                                                   CCGGGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCACGGTGGTGCTGCAGCTGGTCGAAGCAGCGACGCAAGGCGCTGAGCATGCCCAACGCCAGTACGTCGACCTTGAGCAGGCCAACCATGTCCAGGTCATCCTTGTCC  >  5:346722/1‑149                                                                                                                                                   CCGGGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCACGGTGGTGCTGCAGCTGGTCGAAGCAGCGACGCAAGGCGCTGAGCATGCCCAACGCCAGTACGTCGACCTTGAGCAGGCCAACCAT                     <  1:60248/130‑1                                                                                                                                                   CCGGGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCACGGTGGTGCTGCAGCTGGTCGAAGCAGCGACGCAAGGCGCTGAGCATGCCCAACGCCAGTACGTCGACCTTGAGCAGGCCAACCAT                     >  2:60248/1‑130                                                                                                                                                   CCGGGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCACGGTGGTGCTGCAGCTGGTCGAAGCAGCGACGCAAGGCGCTGAGCATGCCCAACGCCAGTACGTCGACCTTGAGAAGGCCAACCATGTCCAGGTCATCCTTGTCC  <  7:26947/149‑1                                                                                                                                                    CGGGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCACGGTGGTGCTGCAGCTGGTCGAAGCAGCGACGCAAGGCGCTGAGCATGCCCAACGCCAGTACGTCGACCTTGAGCAGGCCAACCATGTCCAGGTCATCCTAGTCC  >  3:287027/1‑148                                                                                                                                                                                                                                                                                                         GAGAATGCCGCGATGCCGGAGCGCACGGTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3529690‑3529839 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggccggGTCTTCGCTGGGGATGGTCGCCAGGGTCAGGTGCCGGCCACGGTGGTGCTGCAGCTGGTCGAAGCAGCGACGCAAGGCGCTGAGCATGCCCAACGCCAGTACGTCGACCTTGAGCAGGCCAACCATGTCCAGGTCATCCTTGTCC  <  NC_002947/3529872‑3529728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.