New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3529839	35 (0.590)	3 (0.050)	3/246	NT	7.4%	coding (1656/3102 nt)	dnaEB	error‑prone DNA polymerase
	?	NC_002947	= 3529872	42 (0.760)					coding (1689/3102 nt)	dnaEB	error‑prone DNA polymerase

CGCGATGCCGGAGCGCACGGTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTG  >  NC_002947/3529698‑3529986                                                                                                                                              |                                                                                                                                                    cgcgATGCCGGAGCGCACGGTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGa                                                                                                                                              >  8:45084/1‑149 (MQ=255)        ccGGAGCGCACGGTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGc                                                                                                                                       <  1:158941/149‑1 (MQ=255)        ccGGAGCGCACGGTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGc                                                                                                                                       <  6:237142/149‑1 (MQ=255)                 aCGGTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATccc                                                                                                                              >  5:173538/1‑149 (MQ=255)                 aCGGTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGAGGCCGGCACCTGACCCTGGCGACCATccc                                                                                                                              >  8:292234/1‑149 (MQ=255)                   ggTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATccc                                                                                                                              >  1:36710/1‑147 (MQ=255)                          cAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGa                                                                                                                     <  2:152443/149‑1 (MQ=255)                           aGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGAc                                                                                                                    <  7:45084/149‑1 (MQ=255)                               ggACTAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccg                                                                                                                 >  3:287027‑M2/1‑145 (MQ=255)                               ggACAAGGATGACCTGGACATGGTTGGCCTTCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccgg                                                                                                                <  7:26947‑M2/149‑5 (MQ=255)                               ggACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccgg                                                                                                                >  5:346722‑M2/1‑145 (MQ=255)                                   aaGGATGACCTGGACATGGTTGGCCTTCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccggccac                                                                                                            >  8:26947‑M2/1‑141 (MQ=255)                                   aaGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGgtcttcgctggggatggtcgccagggtcaggtgccggccac                                                                                                            <  4:309522‑M1/149‑42 (MQ=255)                                     ggATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCAcc                                                                                                           >  4:72996/1‑148 (MQ=255)                                             tGGACATGGTTGGCCTGCTCAAGTTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACAAGCTGCAGCACAACCGTCTCAGGCACCAGACCCTGGCGACCATCCCCATCGAAGACCAGGCCACCTACGCCAt                                                                                                   >  1:150776/1‑148 (MQ=255)                                                  aTGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccgg                                                                                                                <  1:60248‑M2/130‑5 (MQ=255)                                                  aTGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccgg                                                                                                                >  2:60248‑M2/1‑126 (MQ=255)                                                  aTGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAg                                                                                             >  3:354734/1‑149 (MQ=255)                                                    ggTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGcc                                                                                           >  1:4586/1‑149 (MQ=255)                                                          ccTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCCTGGCCGGCACCTGACCCTGGCGCCCATCCCCCGCGAAGACCCGGCCACCTAAGCCATGAGCCGCCGTGGCg                                                                                     >  8:303938/1‑149 (MQ=255)                                                           cTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGgtcttcgctggggatggtcgccagggtcaggtgccggccacggtg                                                                                                        >  2:86196‑M1/1‑84 (MQ=255)                                                           cTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGgtcttcgctggggatggtcgccagggtcaggtgccggccacggtg                                                                                                        <  1:86196‑M1/129‑46 (MQ=255)                                                           cTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGcc                                                                                      >  2:41317/1‑147 (MQ=255)                                                           cTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCga                                                                                    <  6:173538/149‑1 (MQ=255)                                                                 aaGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCAt                                                                              >  8:172411/1‑149 (MQ=255)                                                                     tCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGc                                                                          <  4:354734/149‑1 (MQ=255)                                                                     tCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGc                                                                          <  2:4586/149‑1 (MQ=255)                                                                      cGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCg                                                                         >  5:303865/1‑149 (MQ=255)                                                                          gTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGtt                                                                     >  3:346187/1‑149 (MQ=255)                                                                                gCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGa                                                                <  1:41317/148‑1 (MQ=255)                                                                                   ttGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGa                                                            <  7:172411/149‑1 (MQ=255)                                                                                   ttGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGa                                                            <  3:52481/149‑1 (MQ=255)                                                                                       gCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATgg                                                                            <  5:100797/129‑1 (MQ=255)                                                                                       gCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATgg                                                                            >  6:100797/1‑129 (MQ=255)                                                                                        cATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCAc                                                       >  2:122720/1‑149 (MQ=255)                                                                                           gCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCAcgcg                                                    >  7:291658/1‑149 (MQ=255)                                                                                             tCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCAcgcgcg                                                  >  2:238756/1‑149 (MQ=255)                                                                                             tCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCACCGAAGACCCGGCCACCTACGCAATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCa                                                                  <  5:253368/133‑1 (MQ=255)                                                                                                         gTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATg                                      >  1:39291/1‑149 (MQ=255)                                                                                                                    gACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCt                           <  7:292234/149‑1 (MQ=255)                                                                                                                               gcaCCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAg                 >  4:92372/1‑148 (MQ=255)                                                                                                                                  ccaccGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGt             >  2:164841/1‑149 (MQ=255)                                                                                                                                   caccGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagcag                                <  1:86196‑M2/129‑85 (MQ=255)                                                                                                                                   caccGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagcag                                >  2:86196‑M2/1‑45 (MQ=255)                                                                                                                                    accGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTc           >  1:112660/1‑149 (MQ=255)                                                                                                                                       gTGGCCGGgtcttcgctggggatggtcgccagggtcaggtgccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagaaggccaaccatgtccaggtcatcctt        >  8:26947‑M1/1‑8 (MQ=255)                                                                                                                                       gTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagcaggccaaccatgtccaggtcatcctt        <  4:309522‑M2/149‑109 (MQ=255)                                                                                                                                       gTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTAc        <  1:122720/149‑1 (MQ=255)                                                                                                                                          gCCGGCACCTGCCCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGAc     <  6:303865/149‑1 (MQ=255)                                                                                                                                          gCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGAc     <  3:72996/149‑1 (MQ=255)                                                                                                                                           ccGGgtcttcgctggggatggtcgccagggtcaggtgccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagcaggccaaccatgtccaggtcatccttgtcc    >  5:346722‑M1/1‑4 (MQ=255)                                                                                                                                           ccGGgtcttcgctggggatggtcgccagggtcaggtgccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagcaggccaaccat                       <  1:60248‑M1/130‑127 (MQ=255)                                                                                                                                           ccGGgtcttcgctggggatggtcgccagggtcaggtgccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagcaggccaaccat                       >  2:60248‑M1/1‑4 (MQ=255)                                                                                                                                           ccGGgtcttcgctggggatggtcgccagggtcaggtgccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagaaggccaaccatgtccaggtcatccttgtcc    <  7:26947‑M1/149‑146 (MQ=255)                                                                                                                                            cGGgtcttcgctggggatggtcgccagggtcaggtgccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagcaggccaaccatgtccaggtcatcctagtcc    >  3:287027‑M1/1‑3 (MQ=255)                                                                                                                                            cGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGcc                                                                                                     >  7:17466/1‑51 (MQ=255)                                                                                                                                            cGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGcc                                                                                                     <  8:17466/51‑1 (MQ=255)                                                                                                                                             ggCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTg  <  2:39291/149‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                    CGCGATGCCGGAGCGCACGGTGATCCAGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTG  >  NC_002947/3529698‑3529986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.