New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3529839	35 (0.590)	3 (0.050)	3/246	NT	7.4%	coding (1656/3102 nt)	dnaEB	error‑prone DNA polymerase
	?	NC_002947	= 3529872	42 (0.760)					coding (1689/3102 nt)	dnaEB	error‑prone DNA polymerase

AGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTGGTCATCGAGGTCGCCATCGTCCGCCCCGGGCCGA  >  NC_002947/3529724‑3530020                                                                                                                                                     |                                                                                                                                                     aGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGAc                                                                                                                                                      <  7:45084/149‑1 (MQ=255)     ggACTAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccg                                                                                                                                                   >  3:287027‑M2/1‑145 (MQ=255)     ggACAAGGATGACCTGGACATGGTTGGCCTTCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccgg                                                                                                                                                  <  7:26947‑M2/149‑5 (MQ=255)     ggACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccgg                                                                                                                                                  >  5:346722‑M2/1‑145 (MQ=255)         aaGGATGACCTGGACATGGTTGGCCTTCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccggccac                                                                                                                                              >  8:26947‑M2/1‑141 (MQ=255)           ggATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCAcc                                                                                                                                             >  4:72996/1‑148 (MQ=255)                   tGGACATGGTTGGCCTGCTCAAGTTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACAAGCTGCAGCACAACCGTCTCAGGCACCAGACCCTGGCGACCATCCCCATCGAAGACCAGGCCACCTACGCCAt                                                                                                                                     >  1:150776/1‑148 (MQ=255)                        aTGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccgg                                                                                                                                                  <  1:60248‑M2/130‑5 (MQ=255)                        aTGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccgg                                                                                                                                                  >  2:60248‑M2/1‑126 (MQ=255)                        aTGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAg                                                                                                                               >  3:354734/1‑149 (MQ=255)                          ggTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGcc                                                                                                                             >  1:4586/1‑149 (MQ=255)                                ccTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCCTGGCCGGCACCTGACCCTGGCGCCCATCCCCCGCGAAGACCCGGCCACCTAAGCCATGAGCCGCCGTGGCg                                                                                                                       >  8:303938/1‑149 (MQ=255)                                 cTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGcc                                                                                                                        >  2:41317/1‑147 (MQ=255)                                 cTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCga                                                                                                                      <  6:173538/149‑1 (MQ=255)                                       aaGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCAt                                                                                                                >  8:172411/1‑149 (MQ=255)                                           tCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGc                                                                                                            <  4:354734/149‑1 (MQ=255)                                           tCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGc                                                                                                            <  2:4586/149‑1 (MQ=255)                                            cGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCg                                                                                                           >  5:303865/1‑149 (MQ=255)                                                gTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGtt                                                                                                       >  3:346187/1‑149 (MQ=255)                                                      gCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGa                                                                                                  <  1:41317/148‑1 (MQ=255)                                                         ttGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGa                                                                                              <  3:52481/149‑1 (MQ=255)                                                         ttGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGa                                                                                              <  7:172411/149‑1 (MQ=255)                                                             gCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATgg                                                                                                              <  5:100797/129‑1 (MQ=255)                                                             gCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATgg                                                                                                              >  6:100797/1‑129 (MQ=255)                                                              cATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCAc                                                                                         >  2:122720/1‑149 (MQ=255)                                                                 gCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCAcgcg                                                                                      >  7:291658/1‑149 (MQ=255)                                                                   tCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCAcgcgcg                                                                                    >  2:238756/1‑149 (MQ=255)                                                                   tCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCACCGAAGACCCGGCCACCTACGCAATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCa                                                                                                    <  5:253368/133‑1 (MQ=255)                                                                               gTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATg                                                                        >  1:39291/1‑149 (MQ=255)                                                                                          gACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCt                                                             <  7:292234/149‑1 (MQ=255)                                                                                                     gcaCCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAg                                                   >  4:92372/1‑148 (MQ=255)                                                                                                        ccaccGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGt                                               >  2:164841/1‑149 (MQ=255)                                                                                                         caccGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagcag                                                                  >  2:86196‑M2/1‑45 (MQ=255)                                                                                                         caccGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagcag                                                                  <  1:86196‑M2/129‑85 (MQ=255)                                                                                                          accGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTc                                             >  1:112660/1‑149 (MQ=255)                                                                                                             gTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACccggccacggtggtgctgcagctggtcgaagcagcgacgcaaggcgctgagcatgcccaacgccagtacgtcgaccttgagcaggccaaccatgtccaggtcatcctt                                          <  4:309522‑M2/149‑109 (MQ=255)                                                                                                             gTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTAc                                          <  1:122720/149‑1 (MQ=255)                                                                                                                gCCGGCACCTGCCCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGAc                                       <  6:303865/149‑1 (MQ=255)                                                                                                                gCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGAc                                       <  3:72996/149‑1 (MQ=255)                                                                                                                  cGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGcc                                                                                                                                       <  8:17466/51‑1 (MQ=255)                                                                                                                  cGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGcc                                                                                                                                       >  7:17466/1‑51 (MQ=255)                                                                                                                   ggCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTg                                    <  2:39291/149‑1 (MQ=255)                                                                                                                       ccTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATgg                                                                                                              <  1:89681/71‑1 (MQ=255)                                                                                                                       ccTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATgg                                                                                                              >  2:89681/1‑71 (MQ=255)                                                                                                                       ccTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTGGTCa                                >  1:95274/1‑149 (MQ=255)                                                                                                                        cTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCa                                                    >  3:308602/1‑128 (MQ=255)                                                                                                                         tGACCATGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGAACATGGGCGTGTTCCAGATCGAGTCACGCTCGCAAATGGCCATGTTGCCGCGGCTGCGGACCCAGAAGTTCAACGACCTCGTCATc                              >  8:169964/1‑149 (MQ=255)                                                                                                                           aCCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTGGTCATCg                             <  3:92372/148‑1 (MQ=255)                                                                                                                                 gCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTGGTCATCGAGGTCGc                      >  4:27846/1‑149 (MQ=255)                                                                                                                                        tCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTGGTCATCGAGGTCGCCATCGTc               >  3:324729/1‑149 (MQ=255)                                                                                                                                          cccAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTGGTCATCGAGGTCGCCATCGTcc              <  8:291658/148‑1 (MQ=255)                                                                                                                                              gCGAAGACCAGGCCACCTACGCCATGATCAGACGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCACCAGAAGTTCTACGACCTGGTCATCGAGGTCGCCATCGTCCGccaa         >  6:296721/1‑147 (MQ=255)                                                                                                                                                gAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTGGTCATCGAGGTCGCCATCGTCCGCCCCgg       <  4:324729/149‑1 (MQ=255)                                                                                                                                                 aaGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTGGTCATCGAGGTCGCCATCGTCCGCCCCggg      <  1:164841/149‑1 (MQ=255)                                                                                                                                                     cccGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTGGTCATCGAGGTCGCCATCGTCCGCCCCGGGCCGa  >  1:185315/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     AGTGGGACAAGGATGACCTGGACATGGTTGGCCTGCTCAAGGTCGACGTACTGGCGTTGGGCATGCTCAGCGCCTTGCGTCGCTGCTTCGACCAGCTGCAGCACCACCGTGGCCGGCACCTGACCCTGGCGACCATCCCCAGCGAAGACCCGGCCACCTACGCCATGATCAGCCGTGCCGAGACCATGGGCGTGTTCCAGATCGAGTCACGCGCGCAAATGGCCATGTTGCCGCGGCTGCGGCCCCAGAAGTTCTACGACCTGGTCATCGAGGTCGCCATCGTCCGCCCCGGGCCGA  >  NC_002947/3529724‑3530020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.