New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3550919 = | 42 (0.710) | 3 (0.050) | 3/244 | NT | 7.0% | coding (71/957 nt) | PP_3135 | glycosyl transferase |
? | NC_002947 | 3551004 = | 41 (0.750) | coding (156/957 nt) | PP_3135 | glycosyl transferase |
GTTGTTGGCCCGGCCGAAACCCACGTTCTGCTTGTTGCTCAGCAGCAGTGCCTCGGGGCACACCTGGGCCATGCGCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3551073‑3550919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgcatGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGCCTTGCTGCTCAATACCGATGCCTTCGTTGCCGCCGACTCGCTG > NC_002947/3551004‑3551148 GTTGTTGGCCCGGCCGAAACCCACGTTCTGCTTGTTGCTCAGCAGCAGTGCCTCGGGGCACACCTGGGCCATGCGCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCA < 2:348913/149‑1 ATGCGCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGACCGTGGGTTTCGGCCGGGC > 2:14963/1‑148 GCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAAC > 4:235234/1‑148 CGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTT < 3:235234/149‑1 CATGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGCCTTGCTGCTCAATACCGATGCCTTCGTTGCCGCCGACTCGCTG > 2:233954/1‑148 GTTGTTGGCCCGGCCGAAACCCACGTTCTGCTTGTTGCTCAGCAGCAGTGCCTCGGGGCACACCTGGGCCATGCGCTGCACCGAGTCATCGCGCGAGGCATTGTCGACCACCAGGTAACTGGCCAGCCGCTCGCTGTCGGCCCGGCGCAGCGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3551073‑3550919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgcatGGCCCAGGTGTGCCCCGAGGCACTGCTGCTGAGCAACAAGCAGAACGTGGGTTTCGGCCGGGCCAACAACCAGTTGTTGGCGCACCTCAAGGGCAAGTATGCCTTGCTGCTCAATACCGATGCCTTCGTTGCCGCCGACTCGCTG > NC_002947/3551004‑3551148 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |