| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3567752 = | 42 (0.710) | 4 (0.070) | 4/244 | NT | 9.1% | coding (309/1998 nt) | PP_3150 | hypothetical protein |
| ? | NC_002947 | 3567805 = | 41 (0.750) | coding (362/1998 nt) | PP_3150 | hypothetical protein | |||||
TCGGCGAACTGGAAGTTCCACTGGCCTTCGTCATCCAGCCATTCGTCCGCCTGGTACTGCACTTCGGCCGACAGCAGTGCAATGCCGTTTTCGCCCAGCATGCCCAGGCCCATGGCGAACGCTTCGCGATCGAATTGCTGTGCTACCTGGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3567907‑3567752‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcctggGCATGCTGGGCGAAAACGGCATTGCACTGCTGTCGGCCGAAGTGCAGTACCAGGCGGACGAATGGCTGGATGACGAAGGCCAGTGGAACTTCCAGTTCGCCGACCGCTACCGCCAACGGGCCACGCCGCTGCACCCGGTGTACCT > NC_002947/3567805‑3567949 TCGGCGAACTGGAAGTTCCACTGGCCTTCGTCATCCAGCCATTCGTCCGCCTGGTACTGCACTTCGGCCGACAGCAGTGCAATGCCGTTTTCGCCCAGCATGCCCAGGCCCATGGCGAACGCTTCGCGATCGAATTGCTGTGCTACCTG < 7:253893/149‑1 CGAACTGGAAGTTCCACTGGCCTTCGTCATCCAGCCATTCGTCCGCCTGGTACTGCACTTCGGCCGACAGCAGTGCAATGCCGTTTTCGCCCAGCATGCCCAGGCCCATGGCGAACGCTTCGCGATCGAATTGCTGTGCTACCTGGGCC > 7:78814/1‑149 CGAACTGGAAGTTCCACTGGCCTTCGTCATCCAGCCATTCGTCCGCCTAGTACTGCACTTCGGCCGACAGCAGTGCAATGCCGTTTTCGCCCAGCATGCCCAGGCCCATGGCGAACGCTTCGCGATCGAATTGCTGTGCTACCTGGGCC > 8:175910/1‑149 ACTGGAAGTTCCACTGGCCTTCGTCATCCAGCCATTCGTCCGCCTGGTACTGCACTTCGGCCGACAGCAGTGCAATGCCGTTTTCGCCCAGCATGCCCAGGCCCATGGCGAACGCTTCGCGATCGAATTGCTGTGCTACCTGGGCCTGG < 6:41008/149‑1 ATGCCCAGGCCCATGGCGAACGCTTCGCGATCGAATTGCTGTGCTACCTGGGCCTGGGCATGCTGGGCGAAAACGGCATTGCACTGCTGTCGGCCGAAGTGCAGTACCAGGCGGACGAATGGCTGGATGACGAAGGCCAGTGGAACTTC > 6:359987/1‑149 GCCCAGGCCCATGGCGAACGCTTCGCGATCGAATTGCTGTGCTACCTGGGCCTGGGCATGCTGGGCGAAAACGGCATTGCACTGCTGTCGGCCGAAGTGCAGTACCAGGCGGACGAATGGCTGGATGACGAAGGCCAGT > 5:107372/1‑139 GCCCAGGCCCATGGCGAACGCTTCGCGATCGAATTGCTGTGCTACCTGGGCCTGGGCATGCTGGGCGAAAACGGCATTGCACTGCTGTCGGCCGAAGTGCAGTACCAGGCGGACGAATGGCTGGATGACGAAGGCCAGT < 6:107372/139‑1 TGGCGAACGCTTCGCGATCGAATTGCTGTGCTACCTGGGCCTGGGCATGCTGGGCGAAAACGGCATTGCACTGCTGTCGGCCGAAGTGCAGTACCAGGCGGACGAATGGCTGGATGACGAAGGCCAGTGGAACTTCCAGTTCGCCGACC < 5:359987/149‑1 ggGGGCAGGCTGGGCGAAAACGGCATTGCACTGCTGTCGGCCGAAGTGCAGTACCAGGCGGACGAATGGCTGGATGACGAAGGCCAGTGGAACTTCCAGTTCGCCGACCGCTACCGCCAACGGGCCACGCCGCTGCACCCGGTGTACCT < 4:329396/147‑1 TCGGCGAACTGGAAGTTCCACTGGCCTTCGTCATCCAGCCATTCGTCCGCCTGGTACTGCACTTCGGCCGACAGCAGTGCAATGCCGTTTTCGCCCAGCATGCCCAGGCCCATGGCGAACGCTTCGCGATCGAATTGCTGTGCTACCTGGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3567907‑3567752‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcctggGCATGCTGGGCGAAAACGGCATTGCACTGCTGTCGGCCGAAGTGCAGTACCAGGCGGACGAATGGCTGGATGACGAAGGCCAGTGGAACTTCCAGTTCGCCGACCGCTACCGCCAACGGGCCACGCCGCTGCACCCGGTGTACCT > NC_002947/3567805‑3567949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |