| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4207063 = | 46 (0.780) | 4 (0.070) | 4/250 | NT | 9.3% | coding (713/6624 nt) | PP_3691 | DNA helicase‑related protein |
| ? | NC_002947 | 4207100 = | 34 (0.610) | coding (676/6624 nt) | PP_3691 | DNA helicase‑related protein | |||||
GGGTGGCGCGAAGCGAGCTTGGCAACTCGCGTCTGCGGTTTGGAGCGCCGTCGCACGGATGAAGCTCGACTATGCATTGCCGCCAGCCAGCTTTGAACAGTCAGGTCAAAAGGTGCGTAGCCCAAGCCAGATTGCTGATACTGGTTTGGCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4207215‑4207063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctac‑‑GCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCAC > NC_002947/4207100‑4207246 GGGTGGCGCGAAGCGAGCTTGGCAACTCGCGTCTGCGGTTTGGAGCGCCGTCGCACGGATGAAGCTCGACTATGCATTGCCGCCAGCCAGCTTTGAACAGTCAGGTCAAAAGGTGCGTAGCCCAAGCCAGATTGCTGATACTGGTTTGa > 3:217710/1‑148 TCAGGTCAAAAGGTGCGTAGCCCAAGCCAGATTGCTGATACTGGTTTGGCTACCTGCATGGATCTCACCCTGCTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTT > 4:25890/1‑149 GTGCGTAGCCCAAGCCAGATTGCTGATACTGGTTTGGCTAC‑‑GCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCG > 3:6140/1‑149 GCGTAGCCCAAGCCAGATTGCTGATACTGGTTTGGCTAC‑‑GCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGA < 1:3520/124‑1 GCGTAGCCCAAGCCAGATTGCTGATACTGGTTTGGCTAC‑‑GCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGA > 2:3520/1‑124 CTAC‑‑GCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTT > 2:370185/1‑148 AC‑‑GCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCAC > 6:369763/1‑149 GGGTGGCGCGAAGCGAGCTTGGCAACTCGCGTCTGCGGTTTGGAGCGCCGTCGCACGGATGAAGCTCGACTATGCATTGCCGCCAGCCAGCTTTGAACAGTCAGGTCAAAAGGTGCGTAGCCCAAGCCAGATTGCTGATACTGGTTTGGCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4207215‑4207063‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctac‑‑GCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCAC > NC_002947/4207100‑4207246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |