| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4207063 = | 46 (0.780) | 4 (0.070) | 4/250 | NT | 9.3% | coding (713/6624 nt) | PP_3691 | DNA helicase‑related protein |
| ? | NC_002947 | 4207100 = | 34 (0.610) | coding (676/6624 nt) | PP_3691 | DNA helicase‑related protein | |||||
CCTTCATCCACAGTCCTGCGAAAGCGTGACCGCGAGTGAATACGATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTT > NC_002947/4206956‑4207248 | cgaagcgagcttggcaactcgcgtctgcggtttggagcgccgtcgcacggatgaagctcgactatgcattgccgccagccagctttgaacagtcaggtcaaaaggtgcGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑c > 3:6140‑M1/109‑149 (MQ=255) cacaGGCCTGCGAAAGCGTGACCGCGAGTGAATACGATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGa < 2:237849/147‑1 (MQ=255) aactcgcgtctgcggtttggagcgccgtcgcacggatgaagctcgactatgcattgccgccagccagctttgaacagcagggtgagatccatgcagGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGa > 4:25890‑M1/97‑149 (MQ=255) tGCGAAAGCGTGACCGCGAGTGAATACGATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGtt > 8:166461/1‑149 (MQ=255) cGAAAGCGTGACCGCGAGTGAATACGATGACCGGGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGtt > 1:50375/1‑148 (MQ=255) aaaGCGTGACCGCGAGTGAATACGATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCaaa < 3:316826/149‑1 (MQ=255) tctgcggtttggagcgccgtcgcacggatgaagctcgactatgcattgccgccagccagctttgaacagtcaggtcaaaaggtgcGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGc < 1:3520‑M1/39‑1 (MQ=255) tctgcggtttggagcgccgtcgcacggatgaagctcgactatgcattgccgccagccagctttgaacagtcaggtcaaaaggtgcGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGc > 2:3520‑M1/86‑124 (MQ=255) cGATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATa < 1:213265/148‑1 (MQ=255) cGATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATa < 4:347146/148‑1 (MQ=255) gATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCATCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAg < 6:200328/127‑1 (MQ=255) gATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAg > 5:200328/1‑127 (MQ=255) gATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAAt > 8:152245/1‑142 (MQ=255) gATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAAt < 7:152245/142‑1 (MQ=255) c‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCt > 6:369374/1‑149 (MQ=255) gCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGt > 4:19628/1‑149 (MQ=255) tCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCt > 3:345666/1‑149 (MQ=255) cAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAATCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCt < 5:173260/147‑1 (MQ=255) cAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATcc > 8:79068/1‑134 (MQ=255) cAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATcc < 7:79068/134‑1 (MQ=255) gcAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCg > 3:92054/1‑146 (MQ=255) cagGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGtt > 3:295778/1‑149 (MQ=255) tcaggtcaaaaggtgcgtagcccaagccagattgctgatactggtttggctacctGCATGGATCTCACCCTGCTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGtt > 4:25890‑M2/56‑149 (MQ=255) gggTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGc > 8:162843/1‑149 (MQ=255) tGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGcc > 7:321335/1‑147 (MQ=255) gaTCCATGCAGGTAGCCAAACCAGTAGTCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGc > 1:3584/1‑149 (MQ=255) gaTCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTTACCTGACTGTTCAAAGCTGGCTGGCGGCAATGAATAGTCGAGCTTCATCCGTGCGAAGGCGCTCCAAACCGCAGAAGCGAGTTGCCAAGCt > 4:362353/1‑149 (MQ=255) gaTCAATGCAGGTAGCCAAACGAGTA‑TCAGCAATCTGGCTTGGGCTACCCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGAGGCAATGCATAGTCGAGCTTCATCAGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCt > 4:356745/1‑149 (MQ=255) aTCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTc < 7:212775/121‑1 (MQ=255) aTCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTc > 8:212775/1‑121 (MQ=255) cATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGc < 7:162843/148‑1 (MQ=255) cATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCt > 3:107686/1‑149 (MQ=255) aTGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCtt < 5:302174/149‑1 (MQ=255) aTGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCtt > 6:302174/1‑149 (MQ=255) gtgcgtagcccaagccagattgctgatactggtttggctacGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTcg > 3:6140‑M2/42‑149 (MQ=255) gcgtagcccaagccagattgctgatactggtttggctacGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGa < 1:3520‑M2/85‑1 (MQ=255) gcgtagcccaagccagattgctgatactggtttggctacGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGa > 2:3520‑M2/40‑124 (MQ=255) tCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCAccc > 3:217710‑M1/2‑149 (MQ=255) aaaCCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCAccc > 4:217710/1‑147 (MQ=255) tCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGa < 6:293424/73‑1 (MQ=255) aGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGGCTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATc > 1:171669/1‑147 (MQ=255) aGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATcc < 2:50375/148‑1 (MQ=255) aTCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGa < 7:166461/149‑1 (MQ=255) gCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGAt < 3:19628/145‑1 (MQ=255) cTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGa < 4:107686/149‑1 (MQ=255) ctacGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGtt > 2:370185‑M2/5‑148 (MQ=255) acGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCAc > 6:369763‑M2/3‑149 (MQ=255) gCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGGGATGAGGCCAGTTCCCtt > 5:250510/1‑149 (MQ=255) gCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACtt > 5:226015/1‑149 (MQ=255) | CCTTCATCCACAGTCCTGCGAAAGCGTGACCGCGAGTGAATACGATGACC‑GGGTTGAGCCCGATTTGCTCCAGGGCAGCGCAGAACAGCAGGGTGAGATCCATGCAGGTAGCCAAACCAGTA‑TCAGCAATCTGGCTTGGGCTACGCA‑CCTTTTGACCTGACTGTTCAAAGCTGGCTGGCGGCAATGCATAGTCGAGCTTCATCCGTGCGACGGCGCTCCAAACCGCAGACGCGAGTTGCCAAGCTCGCTTCGCGCCACCCTCGTAACCATCCAGCGATGAGGACAGTTCACTT > NC_002947/4206956‑4207248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |