New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4350267 = | 39 (0.660) | 5 (0.090) | 4/248 | NT | 10.9% | coding (833/915 nt) | PP_3822 | cytochrome c family protein |
? | NC_002947 | 4350307 = | 45 (0.810) | coding (793/915 nt) | PP_3822 | cytochrome c family protein |
TACCGCGGCGTCGTTCATCAAGTACAACATGCCGCTGGGCAAGCCGGGCAGCCTCAGCGATCAGCAGGCCTGGGACGTGGCGGCGTGGATCAACCGCCACGAGCGGCCACAGGACCCGCGGTTGGTAGAGGGATCCATCGAGAAGACGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4350419‑4350267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgggtCCTGTGGCCGCTCGTGGCGGTTGATCCACGCCGCCACGTCCCAGGCCTGCTGATCGCTGAGGCTGCCCGGCTTGCCCAGCGGCATGTTGTACTTGATGAACGACGCCGCGGTATTGATGCGGTGCATGCCAGCCCCCCAGTTGTAG > NC_002947/4350307‑4350452 TACCGCGGCGTCGTTCATCAAGTACAACATGCCGCTGGGCAAGCCGGGCAGCCTCAGCGATCAGCAGGCCTGGGACGTGGCGGCGTGGATCAACCGCCACGAGCGGCCACAGGACCCGCGGTTGGTAGAGGGATCCATCGAGGAGACGC < 4:237999/149‑1 CAGGACCCGCGGTTGGTAGAGGGATCCATCGAGAAGACGCGGGTCCTGTGGCCGCTCGTGGCGGTTGATCCACGCCGCCACGTCCCAGGCCTGCTGATCGCTGAGGCTGCCCGGCTTGCCCAGCGGCATGTTGTACTTGATGAACGACG > 4:240460/1‑149 AGGACCCGCGGTTGGTAGAGGGATCCATCGAGAAGACGCGGGTCCTGTGGCCGCTCGTGGCGGTTGATCCACGCCGCCACGTCCCAGGCCTGCTGATCGCTGAGGCTGCCCGGCTTGCCCAGCGGCATGTTGTACTTGATGAACGACGC > 5:61379/1‑149 AGGACCCGCGGTTGGTAGAGGGATCCATCGAGAAGACGCGGGTCCTGTGGCCGCTCGTGGCGGTTGATCCACGCCGCCACGTCCCAGGCCTGCTGATCGCTGAGGCTGCCCGGCTTGCCCAGCGGCATGTTGTACTTGATGAACGACGC > 6:194888/1‑149 CCCGCGGTTGGTAGAGGGATCCATCGAGAAGACGCGGGTCCTGTGGCCGCTCGTGGCGGTTGATCCACGCCGCCACGTCCCAGGCCTGCTGATCGCTGAGGCTGCCCGGCTTGCCCAGCGGCATGTTGTACTTGATGAACGACGCCGCG < 6:61379/149‑1 GAGGGATCCATCGAGAAGACGCTGGTCCTGTGGCCGCTCGTGGCGGTTGATCCACGCCGCCACGTCCCAGGCCTGCTGATCGCTGAGGCTGCCCGGCTTGCCCAGCGGCATGTTGTACTTGATGAACGACGCCGCGGTATTGATGCGGT < 5:194888/149‑1 GGTCCTGTGGCCGCTCGTGGCGGTTGATCCACGCCGCCACGTCCCAGGCCTGCTGATCGCTGAGGCTGCCCGGCTTGCCCAGCGGCATGTTGTACTTGATGAACGACGCCGCGGTATTGATGCGGTGCATGCCAGCCCCCCAGTTGTAG < 2:30082/149‑1 TACCGCGGCGTCGTTCATCAAGTACAACATGCCGCTGGGCAAGCCGGGCAGCCTCAGCGATCAGCAGGCCTGGGACGTGGCGGCGTGGATCAACCGCCACGAGCGGCCACAGGACCCGCGGTTGGTAGAGGGATCCATCGAGAAGACGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4350419‑4350267 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgggtCCTGTGGCCGCTCGTGGCGGTTGATCCACGCCGCCACGTCCCAGGCCTGCTGATCGCTGAGGCTGCCCGGCTTGCCCAGCGGCATGTTGTACTTGATGAACGACGCCGCGGTATTGATGCGGTGCATGCCAGCCCCCCAGTTGTAG > NC_002947/4350307‑4350452 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |