| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4359674 = | 43 (0.730) | 3 (0.050) | 3/248 | NT | 6.5% | coding (282/1446 nt) | PP_3834 | hypothetical protein |
| ? | NC_002947 | 4359711 = | 45 (0.810) | coding (245/1446 nt) | PP_3834 | hypothetical protein | |||||
ATCAGCTGGCCTGCGGCCACGTGCGTGGCGGTGGTCGCGTGCTGGTGGCCACTTTGCTGAGCGAGTCGCACGAACGCTTGTTCCAGTACCTGTCCACGCTGGACTTCTTCGACCCGGCGCTGGTCGGTGACAAAATCCAGTTCGTCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4359825‑4359674‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccGGGTCGAAGAAGTCCAGCGTGGACAGGTACTGGAACAAGCGTTCGTGCGACTCGCTCAGCAAAGTGGCCACCAGCACGCGACCACCGCCACGCACGTGGCCGCAGGCCAGCTGATTGGCGAGGATGGTCTTACCGGCCCCCGGCG > NC_002947/4359711‑4359855 ATCAGCTGGCCTGCGGCCACGTGCGTGGCGGTGGTCGCGTGCTGGTGGCCACTTTGCTGAGCGAGTCGCACGAACGCTTGTTCCAGTACCTGTCCACGCTGGACTTCTTCGACCCGGCGCTGGTCGGTGACAAAATCCAGTTCGTCAGC < 6:71936/149‑1 AGCTGGCCTGCGGCCACGTGCGTGGCGGTGGTCGCGTGCTGGTGGCCACTTTGCTGAGCGAGTCGCACGAACGCTTGTTCCAGTACCTGTCCACGCTGGACTTCTTCGACCCGGCGCTGGTCGGTGACAAAATCCAGTTCGTCAGCGCC > 5:294559/1‑149 TGAGCGAGTCGCACGAACGCTTGTTCCAGTACCTGTCCACGCTGGACTTCTTCGACCCGGCGCTGGTCGGTGACAAAATCCAGTTCGTCAGCGC > 5:83267/1‑94 TGAGCGAGTCGCACGAACGCTTGTTCCAGTACCTGTCCACGCTGGACTTCTTCGACCCGGCGCTGGTCGGTGACAAAATCCAGTTCGTCAGCGC < 6:83267/94‑1 TTCGACCCGGCGCTGGTCGGTGACAAAATCCAGTTCGTCAGCGCCGGGTCGAAGAAGTCCAGCGTGGACAGGTACTGGAACAAGCGTTCGTGCGACTCGCTCAGCAAAGTGGCCACCAGCACGCGACCACCGCCACGCACGTGGCCG > 3:195113/1‑147 CCCGGCGCTGGTCGGTGACAAAATCCAGTTCGTCAGCGCCGGGTCGAAGAAGTCCAGCGTGGACAGGTACTGGAACAAGCGTTCGTGCGACTAGCTCAGCAAAGTGGCCACCAGCACGCGACCACCGCCACGCACGTGGCCGCAGGC > 7:141198/1‑147 CCGGCGCTGGTCGGTGACAAAATCCAGTTCGTCAGCGCCGGGTCGAAGAAGTCCAGCGTGGACAGGTACTGGAACAAGCGTTCGTGCGACTCGCTCAGCAAAGTGGCCACCAGCACGCGACCACCGCCACGCACGTGGCCGCAGGCCAG > 6:47434/1‑149 CGCCGGGTCGAAGAAGTACAGCGTGGACAGGTACTGGAACAAGCGTTCGTGCGACTCGCTCAGCAAAGTGGCCACCAGCACGCGACCACCGCCACGCACGTGGCCGCAGGCCAGCTGATTGGCGAGGATGGTCTTACCGGCCCCCGGCG < 8:141198/149‑1 ATCAGCTGGCCTGCGGCCACGTGCGTGGCGGTGGTCGCGTGCTGGTGGCCACTTTGCTGAGCGAGTCGCACGAACGCTTGTTCCAGTACCTGTCCACGCTGGACTTCTTCGACCCGGCGCTGGTCGGTGACAAAATCCAGTTCGTCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4359825‑4359674‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccGGGTCGAAGAAGTCCAGCGTGGACAGGTACTGGAACAAGCGTTCGTGCGACTCGCTCAGCAAAGTGGCCACCAGCACGCGACCACCGCCACGCACGTGGCCGCAGGCCAGCTGATTGGCGAGGATGGTCTTACCGGCCCCCGGCG > NC_002947/4359711‑4359855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |