| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4585270 = | 51 (0.870) | 3 (0.050) | 3/250 | NT | 6.4% | coding (314/1986 nt) | glgE | alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase |
| ? | NC_002947 | 4585326 = | 39 (0.690) | coding (258/1986 nt) | glgE | alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase | |||||
GCCACGACCGCCTGGCGGTGATGCTCAACTGGCGCCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4585420‑4585270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGGCCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGG > NC_002947/4585326‑4585468 GCCACGACCGCCTGGCGGTGATGCTCAACTGGCGCCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCC < 3:110023/149‑1 CACGACCGCCTGGCGGTGATGCTCAACTGGCGCCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCCTG > 3:42091/1‑149 CACGACCGCCTGGCGGTGATGCTCAACTGGCGCCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCCTG > 4:323473/1‑149 CCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAG > 1:273796/1‑112 CCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAG < 2:273796/112‑1 CTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCG > 3:296058/1‑149 TGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGT < 4:296058/148‑1 GCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGT > 1:9994/1‑149 GGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGGCCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGG > 8:176354/1‑149 GGCCTGCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGGCCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACG < 5:290440/148‑1 GCCACGACCGCCTGGCGGTGATGCTCAACTGGCGCCAGGCCCACAGCCGGCGCTGGCATTGCGTGCCGATGCAGTCGGCGGGCAACGACCTGTGGCAGGCCGAATTCACCCCCACCGAGCTGGGCCCGCACCGGTTCAGTATCGAGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4585420‑4585270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgCCACAGGTCGTTGCCCGCCGACTGCATCGGCACGCAATGCCAGCGCCGGCTGTGGGCCTGGCGCCAGTTGAGCATCACCGCCAGGCGGTCGTGGCCGTCGCTGTAGGCCTTGGTGCTGACGGCCACAGGCTGGCCGCTGACGG > NC_002947/4585326‑4585468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |