| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4679619 | 43 (0.730) | 4 (0.070) | 3/246 | NT | 9.0% | coding (338/447 nt) | rnhA | ribonuclease H |
| ? | NC_002947 | = 4679643 | 41 (0.740) | coding (314/447 nt) | rnhA | ribonuclease H | |||||
GCTCCAACTTGCATCCGTTACAAAGGCCGCGATTGTACCCCAGCTCAACGCTGGGCGCGCACCTCATCGACCCCACGGTTGGCCAGCTGGTCGGCGCGTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCAGGTTACCTTGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4679466‑4679619‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgtggcAGCAGCTCGATGAGCAGGTCAACCGCCACAAGGTAACCTGGAAGTGGGTGCGCGGCCATATTGGCCACCCCGGCAACGAACGCGCCGACCAGCTGGCCAACCGTGGGGTCGATGAGGTGCGCGCCCAGCGTTGAGCTGGGGTACAATC < NC_002947/4679643‑4679496 GCTCCAACTTGCATCCGTTACAAAGGCCGCGATTGTACCCCAGCTCAACGCTGGGCGCGCACCTCATCGACCCCACGGTTGGCCAGCTGGTCGGCGCGTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCAGGTTACCTT > 3:286206/1‑149 TCCAACTTGCATCCGTTACAAAGGCCGCGATTGTACCCCAGCTCAACGCTGGGCGCGCACCTCATCGACCCCACGGTTGGCCAGCTGGTCGGCGCGTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCAGGTTACCTTGT > 3:301050/1‑149 TCCAACTTGCATCCGTTACAAAGGCCGCGATTGTACCCCAGCTCAACGCTGGGCGCGCACCTCATCGACCCCACGGTTGGCCAGCTGGTCGGCGCGTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCAGGTTACCTTGT > 5:141997/1‑149 TCCAACTTCCATCCGTTACAAAGGCCGCGATTCTACCCCAGCTAAACGCTGGGCCCGCACCTCATCGACCCCACGGATTGCAAGCTGGACGCCCCCTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCACGTAACCTTGT > 5:121787/1‑149 CAACTTGCATCCGTTACAAAGGCCGCGATTGTACCCCAGCTCAACGCTGGGCGCGCACCTCATCGACCCCACGGTTGGCCAGCTGGTCGGCGCGTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCAGGTTACCTTGTGG < 8:29199/149‑1 CCCCAGCTCAACGCTGGGCGCGCACCTCATCGACCCCACGGTTGGCCAGCTGGTCGGCGCGTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCAGGTTACCTTGTGGCAGCAGCTCGATGAGCAGGTCAACCGCCACAAG < 2:337333/149‑1 CCCCAGCTCAACGCTGGGCGCGCACCTCATCGACCCCACGGTTGGCCAGCTGGTCGGCGCGTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCAGGTTACCTTGTGGCAGCAGCTCGATGAGCAGGTCAACCGCCACAAG < 3:10668/149‑1 CTCAACGCTGGGCGCGCACCTCATCGACCCCACGGTTGGCCAGCTGGTCGGCGCGTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCAGGTTACCTTGTGGCAGCAGCTCGATGAGGAGGTCAACCGCCACAAGGTAACC < 6:121787/149‑1 CGCTGGGCGCGCACCTCATCGACCCCACGGTTGGCCAGCTGGTCGGCGCGTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCAGGTTACCTTGTGGCAGCAGCTCGATGAGCAGGTCAACCGCCACAAG > 4:74165/1‑138 GGCAGCAGCTCGATGAGCAGGTCAACCGCCACAAGGTAACCTGGAAGTGGGTGCGCGGCCAAATTGGCCACCCCGGCAACGAACGCGCCGACCAGCTGGCCAACCGTGGGGTCGATGAGGTGCGCGCCCAGCGTTGAGCTGGGGTACAA > 1:196054/1‑149 CAGCAGCTCGATGAGCAGGTCAACCGCCACAAGGTAACCTGGAAGTGGGTGCGCGGCCATATTGGCCACCCCGGCAACGAACGCGCCGACCAGCTGGCCAACCGTGGGGTCGATGAGGTGCGCGCCCAGCGTTGAGCTGGGGTACAATC < 7:289721/149‑1 GCTCCAACTTGCATCCGTTACAAAGGCCGCGATTGTACCCCAGCTCAACGCTGGGCGCGCACCTCATCGACCCCACGGTTGGCCAGCTGGTCGGCGCGTTCGTTGCCGGGGTGGCCAATATGGCCGCGCACCCACTTCCAGGTTACCTTGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4679466‑4679619‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgtggcAGCAGCTCGATGAGCAGGTCAACCGCCACAAGGTAACCTGGAAGTGGGTGCGCGGCCATATTGGCCACCCCGGCAACGAACGCGCCGACCAGCTGGCCAACCGTGGGGTCGATGAGGTGCGCGCCCAGCGTTGAGCTGGGGTACAATC < NC_002947/4679643‑4679496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |