| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5153334 | 40 (0.680) | 5 (0.090) | 5/252 | NT | 11.4% | intergenic (‑1411/+3) | PP_5696/PP_4537 | hypothetical protein/membrane protein |
| ? | NC_002947 | = 5153367 | 39 (0.690) | coding (846/876 nt) | PP_4537 | membrane protein | |||||
GGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5153184‑5153334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgCGCACAGGCGCCGCTGGCCGGCAAGGCCTGACTCGCCCTTTGATCCGGGGGCTGCAGGGCAGCCCCGGCAATCTCAAGCCTCACTCATATCTTCAATGCGACGCGGCATCGGCTCTGCCGCCGTGCGCCCGGCCAACCCCACGCGCAT < NC_002947/5153367‑5153220 GGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAGGG < 5:330863/149‑1GGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAGGG < 6:137237/149‑1 GCAATGACATGCGCGTGGGGTTGGCCGGGCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAG < 3:339604/119‑1 GCAATGACATGCGCGTGGGGTTGGCCGGGCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAG > 4:339604/1‑119 CAATGACATGCGCGTGGGGTTGGCCGGGCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAGGGCGCGCACAGGCGCCGCTGGCCGGCAAGGC < 6:336464/149‑1 GCCGGGCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAGGGCGCGCACAGGCGCCGCTGGCCGGCAAGGCCTGACTCGCCCTTTGAT < 2:307409/144‑1 GCCGGGCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAGGGCGCGAACAGGCGCCGCTGGCCGGCAAGGCCTGACTCGCCCTTTGAT > 1:307409/1‑144 GCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAGGGCGCGCACAGGCGCCGCTGGCCGGCAAGGCCTGACTCGCCCTTTGATC > 3:275195/1‑140 GCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAGGGCGCGCACAGGCGCCGCTGGCCGGCAAGGCCTGACTCGCCCTTTGATC < 4:275195/140‑1 GCGCACAGGCGCCGCTGGCCGGCAAGGCCTGACTCGCCCTTTGATCCGGGGGCTGCAGGGCAGCCCCGGCAATCTCAAGCCTCACTCATATCTTCAATGCGACGCGGCATCGGCTCTGCCGCCGTGCGCCCGGCCAACCCTACGCGCAT > 7:124168/1‑149 GGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGCACGGCGGCAGAGCCGATGCCGCGTCGCATTGAAGATATGAGTGAGGCTTGAGATTGCCGGGGCTGCCCTGCAGCCCCCGGATCAAAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5153184‑5153334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgCGCACAGGCGCCGCTGGCCGGCAAGGCCTGACTCGCCCTTTGATCCGGGGGCTGCAGGGCAGCCCCGGCAATCTCAAGCCTCACTCATATCTTCAATGCGACGCGGCATCGGCTCTGCCGCCGTGCGCCCGGCCAACCCCACGCGCAT < NC_002947/5153367‑5153220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |