New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1880369 =	53 (0.900)	5 (0.090)	5/248	NT	9.2%	coding (43/930 nt)	PP_1688	LysR family transcriptional regulator
	?	NC_002947	1880411 =	49 (0.880)					coding (85/930 nt)	PP_1688	LysR family transcriptional regulator

TGAGAGCTGAGTGGAAGCGCAGATTAGCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCA  >  NC_002947/1880222‑1880517                                                                                                                                                    |                                                                                                                                                     ggccagatcacgctcgatatgctttacacgctcgtaatactgggcgccagatggcgtcagggccatgctgcgtgtggttcggctgagcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGa                                                                                                                                                     >  4:209458‑M1/148‑149 (MQ=255)      gCTGAGTGGAAGCGCAGATTAGCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCg                                                                                                                                                <  6:33589/149‑1 (MQ=255)      gCTGAGTGGAAGCGCAGATTAGCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCg                                                                                                                                                <  2:278082/149‑1 (MQ=255)       cTGAGTGGAAGCGCAGATTAGCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCgg                                                                                                                                               >  4:271655/1‑149 (MQ=255)        tGAGTGGAAGCGCAGATTAGCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCgg                                                                                                                                               >  1:196374/1‑148 (MQ=255)          aGTGGAAGCGCAGATTAGCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTa                                                                                                                                             <  6:283133/148‑1 (MQ=255)            gctcgatatgctttacacgctcgtaatactgggcgccagatggcgtcagggccatgctgcgtgtggttcggctgagcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAg                                                                                                                                                    <  4:143244‑M1/3‑1 (MQ=255)            gctcgatatgctttacacgctcgtaatactgggcgccagatggcgtcagggccatgctgcgtgtggttcggctgagcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAg                                                                                                                                                    >  3:143244‑M1/137‑139 (MQ=255)              gAAGCGCAGATTAGCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATACAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATc                                                                                                                                        <  5:352811/149‑1 (MQ=255)                   gcAGATTAGCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCgctgc                                                                                                                                   >  1:339855/1‑149 (MQ=255)                     gctttacacgctcgtaatactgggcaccagatggcgtcagggccatgctgcgtgtggttcggctgagcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactg                                                                                                                                                      >  5:123847‑M1/128‑128 (MQ=255)                     gctttacacgctcgtaatactgggcaccagatggcgtcagggccatgctgcgtgtggttcggctgagcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactg                                                                                                                                                      <  6:123847‑M1/1‑1 (MQ=255)                      gATTAGCAACCTGCGCGCCTACAGCTGTAGCCCGGCAGCATTGAGTGCTGTATAAAGAAATTCTTACGCAGCCCAGCGCTCAGCATGGCCCTGCTCAACGCCATTCGCTGCTTCAGCGAGGTGGTCGCGGCCGGTAGCATCGCTGCTgg                                                                                                                                >  8:347655/1‑149 (MQ=255)                        ttAGCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGt                                                                                                                               <  5:41396/148‑1 (MQ=255)                           gCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGccc                                                                                                                           >  6:164564/1‑149 (MQ=255)                            acgctcgtaatactgggcgccagatggcgtcagggccatgctgcgtgtggttcggctgagcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAGGCCGGTAGCATCGCTGCTGGTGCCCg                                                                                                                          <  2:338523‑M1/29‑1 (MQ=255)                                   cgcgcCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATtctc                                                                                                                   <  4:327709/149‑1 (MQ=255)                                      gcCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGc                                                                                                                <  6:326964/149‑1 (MQ=255)                                           ggcgccagatggcgtcagggccatgctgcgtgtggttcggctgagcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCa                                                                                                            >  1:338523‑M1/106‑148 (MQ=255)                                             cgccagatggcgtcagtgccatgctgcgtgtggttcggctgagcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAGGCCGGTAGCATCGCAGCTGGTGCCCGTATTCTCGGCCTCAGTc                                                                                                         >  1:209201‑M1/104‑149 (MQ=255)                                              cTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTTGTCGAGGCCGGTAGTATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTcc                                                                                                        <  1:242224/149‑1 (MQ=255)                                              cTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTcc                                                                                                        <  5:311679/149‑1 (MQ=255)                                                 tAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGc                                                                                                     <  1:44573/149‑1 (MQ=255)                                                   gACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAg                                                                                                   >  2:119940/1‑149 (MQ=255)                                                   gACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGGGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCa                                                                                                    <  6:100796/148‑1 (MQ=255)                                                    aCCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGctgctg                                                                                                                                 <  7:256385/118‑1 (MQ=255)                                                    aCCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGctgctg                                                                                                                                 >  8:256385/1‑118 (MQ=255)                                                      cGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCg                                                                                                >  2:1133/1‑149 (MQ=255)                                                                  gTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAg                                                                                                                                                    <  2:127997/85‑1 (MQ=255)                                                                  gTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAg                                                                                                                                                    >  1:127997/1‑85 (MQ=255)                                                                     cTTTATAAAGAAATTCTTGCGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTg                                                                                  <  2:274876/148‑1 (MQ=255)                                                                     cTTTATAAAGAAATTCTTGCGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTg                                                                                  >  1:274876/1‑148 (MQ=255)                                                                        tataAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTgg                                                                                 <  7:149076/146‑1 (MQ=255)                                                                        tataAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTgg                                                                                 <  5:164564/146‑1 (MQ=255)                                                                             aGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGATCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTg                                                                         >  7:233645/1‑149 (MQ=255)                                                                                   tCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGc                                                                   >  2:15993/1‑149 (MQ=255)                                                                                    cTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGc                                                                   <  3:271655/148‑1 (MQ=255)                                                                                     ttACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGc                                                                           <  7:342886/139‑1 (MQ=255)                                                                                     ttACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGc                                                                           >  8:342886/1‑139 (MQ=255)                                                                                     ttACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCa                                                                 >  4:273896/1‑149 (MQ=255)                                                                                      agcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAg                                                                                                           >  8:313864‑M1/63‑106 (MQ=255)                                                                                      agcaggcgtacttgcaggtggccttccagccgcgccaggttctggctgacggctgccggactGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAg                                                                                                           <  7:313864‑M1/44‑1 (MQ=255)                                                                                       aCGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCAcc                                                               >  1:170875/1‑149 (MQ=255)                                                                                        cGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCCCCt                                                              >  4:95081/1‑149 (MQ=255)                                                                                         gAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTg                                                             >  1:174197/1‑149 (MQ=255)                                                                                          aaTCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGc                                                            <  2:196374/149‑1 (MQ=255)                                                                                            tCCAAGCGCTCACCATGGACCTGATCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCaa                                                          <  8:233645/149‑1 (MQ=255)                                                                                                     tCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTg                                                 >  4:295315/1‑149 (MQ=255)                                                                                                      cACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCaa                                                          >  1:37483/1‑139 (MQ=255)                                                                                                      cACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCaa                                                          <  2:37483/139‑1 (MQ=255)                                                                                                      cACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGc                                                >  7:264600/1‑149 (MQ=255)                                                                                                       aCCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCGGGCGCGGCTGGAAGGCCACCTGCAAGTACGcc                                                   >  5:264097/1‑145 (MQ=255)                                                                                                       aCCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCGGGCGCGGCTGGAAGGCCACCTGCAAGTACGcc                                                   <  6:264097/145‑1 (MQ=255)                                                                                                           tGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGc                                           <  3:295315/149‑1 (MQ=255)                                                                                                                   cTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACcac                                   <  8:264600/149‑1 (MQ=255)                                                                                                                           cATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATtctc                                                                                                                   <  5:110804/61‑1 (MQ=255)                                                                                                                           cATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATtctc                                                                                                                   >  6:110804/1‑61 (MQ=255)                                                                                                                                gctgctTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTAAGTCCGGCAGCCGTCAGACAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGcc                      >  2:253004/1‑149 (MQ=255)                                                                                                                                     ttCATCATGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGCACACCACGCAGCATGGCCCTGAc                 >  8:324256/1‑149 (MQ=255)                                                                                                                                     ttCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGAc                 >  6:2959/1‑149 (MQ=255)                                                                                                                                      tcatcaAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGc                                                                                           <  2:355359/74‑1 (MQ=255)                                                                                                                                      tcatcaAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGc                                                                                           >  1:355359/1‑74 (MQ=255)                                                                                                                                       catcaAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACg                <  2:174197/148‑1 (MQ=255)                                                                                                                                        atcaAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGc               >  4:355073/1‑148 (MQ=255)                                                                                                                                         tcaAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCa             >  3:107932/1‑149 (MQ=255)                                                                                                                                                    GAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCa  >  2:170875‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     TGAGAGCTGAGTGGAAGCGCAGATTAGCAACCTGCGCGCCTACAGCTGTAGACCGGCAGCATTGAGTTCTTTATAAAGAAATTCTTACGAATCCAAGCGCTCACCATGGACCTGCTCAACGCCATTCGCTGCTTCATCAAGGTGGTCGAGGCCGGTAGCATCGCTGCTGGTGCCCGTATTCTCGGCCTCAGTCCGGCAGCCGTCAGCCAGAACCTGGCGCGGCTGGAAGGCCACCTGCAAGTACGCCTGCTCAGCCGAACCACACGCAGCATGGCCCTGACGCCATCTGGCGCCCA  >  NC_002947/1880222‑1880517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.